Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MAPK10-383ENST00000642032 3390 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MAPK10-365ENST00000641902 3825 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC110597.1-201ENST00000562669 3176 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AL136100.1-201ENST00000407696 330 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AL451061.1-201ENST00000407887 862 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AL139100.1-201ENST00000408001 498 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP231-201ENST00000410496 138 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AL663061.1-201ENST00000416625 580 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC092646.1-201ENST00000427142 901 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 PAICSP2-201ENST00000429118 1150 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AL049634.1-201ENST00000453770 1720 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 TAAR4P-201ENST00000454843 1039 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RBMY2EP-202ENST00000456360 940 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC089999.1-201ENST00000460336 374 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL705P-201ENST00000481678 294 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RPL23AP80-201ENST00000495605 424 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 TRIM53CP-201ENST00000531490 1354 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 MIR8082-201ENST00000612488 81 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC120057.5-201ENST00000623840 154 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 AC104820.1-201ENST00000624183 307 ntBASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.65□□□□□ -1.18
CDK5RAP3Q96JB5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.19
CDK5RAP3Q96JB5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CDK5RAP3Q96JB5 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDK5RAP3Q96JB5 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDK5RAP3Q96JB5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 RNU4-23P-201ENST00000362839 140 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 EEF1GP6-201ENST00000402309 905 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC009500.1-201ENST00000420684 583 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC010086.1-201ENST00000437359 1052 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 RPS10P14-201ENST00000440748 502 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 CRYGGP-201ENST00000443337 145 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 BZW1P1-201ENST00000454901 1240 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 RNA5SP318-201ENST00000516352 92 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 RBMS2P1-201ENST00000525031 1226 ntBASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.64□□□□□ -1.19
CDK5RAP3Q96JB5 AC117503.3-201ENST00000623811 601 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms