Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP001803.1-201ENST00000525668 147 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AP003080.1-202ENST00000526526 915 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 GLYATL1P4-201ENST00000529326 906 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 SLC25A51P2-201ENST00000535708 889 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC126323.4-201ENST00000566935 234 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC073862.4-201ENST00000622982 854 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC012629.3-201ENST00000623397 328 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC026108.1-201ENST00000635444 547 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC233968.1-201ENST00000611212 1300 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC093844.1-201ENST00000514910 1361 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AP005432.1-201ENST00000580891 3485 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 RPL12P13-201ENST00000310055 497 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 RN7SKP55-201ENST00000364888 307 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 RNA5SP53-201ENST00000391299 120 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 RN7SKP232-201ENST00000410170 290 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 RN7SKP254-201ENST00000410685 310 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 TRGV7-201ENST00000427089 353 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AL121578.1-201ENST00000428051 892 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC005517.1-201ENST00000452091 489 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 RPL36AP55-201ENST00000454114 305 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AP005202.1-201ENST00000489915 867 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 RPS10P20-201ENST00000494130 463 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VMP1Q96GC9 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC107952.1-201ENST00000524200 376 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AL078624.2-201ENST00000605063 554 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 AC034229.6-201ENST00000623704 224 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AP003108.4-201ENST00000623917 878 ntBASIC6.63□□□□□ -1.35
VMP1Q96GC9 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VMP1Q96GC9 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC097063.1-201ENST00000426714 1797 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC090771.1-201ENST00000585803 1618 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL356361.1-201ENST00000400943 1459 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 KYNUP2-201ENST00000582280 1329 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms