Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL590682.1-201ENST00000437248 344 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 DNAJA1P6-201ENST00000437347 354 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 RPS7P11-201ENST00000484240 586 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 OR5H3P-201ENST00000502817 919 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC113352.1-201ENST00000513196 666 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 OR9L1P-201ENST00000529493 933 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 RN7SL376P-201ENST00000578594 264 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC010719.1-201ENST00000602992 747 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 SNX29P2-204ENST00000603801 875 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC012488.1-201ENST00000611221 640 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC012676.3-201ENST00000614983 479 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AL390195.2-201ENST00000564771 2023 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC023818.2-201ENST00000623817 2304 ntBASIC6.99□□□□□ -1.29
ATG4DQ86TL0 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.99□□□□□ -1.29
ATG4DQ86TL0 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 OR9K2-201ENST00000305377 1122 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 SNORD113-6-201ENST00000363345 75 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 RNA5SP427-201ENST00000365323 119 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC011753.4-201ENST00000417974 311 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 RN7SL36P-201ENST00000469345 276 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 SYPL1P1-201ENST00000473622 768 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC087385.2-201ENST00000477729 498 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC011825.1-201ENST00000484967 388 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 RPL9P15-201ENST00000491096 532 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC090543.1-201ENST00000492168 485 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC147055.3-201ENST00000510547 851 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AP004833.3-201ENST00000531893 322 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 NBEAP1-201ENST00000554452 979 ntBASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.98□□□□□ -1.29
ATG4DQ86TL0 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms