Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.87□□□□□ -1.47
CAV3P56539 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.87□□□□□ -1.47
CAV3P56539 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.87□□□□□ -1.47
CAV3P56539 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CAV3P56539 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CAV3P56539 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CAV3P56539 AL137918.1-201ENST00000624542 1922 ntBASIC5.87□□□□□ -1.47
CAV3P56539 MAPK10-357ENST00000641831 2858 ntBASIC5.87□□□□□ -1.47
CAV3P56539 ZNF402P-201ENST00000404435 3100 ntBASIC5.87□□□□□ -1.47
CAV3P56539 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAV3P56539 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CAV3P56539 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CAV3P56539 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.86□□□□□ -1.47
CAV3P56539 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 CCAT2-201ENST00000630920 1752 ntBASIC5.86□□□□□ -1.47
CAV3P56539 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 AL451064.2-201ENST00000623514 1654 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AC005831.1-201ENST00000624384 1697 ntBASIC5.86□□□□□ -1.47
CAV3P56539 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AC090774.4-201ENST00000578888 1372 ntBASIC5.86□□□□□ -1.47
CAV3P56539 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CAV3P56539 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CAV3P56539 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 AL451046.1-201ENST00000406097 534 ntBASIC5.86□□□□□ -1.47
CAV3P56539 SNORA11D-201ENST00000408548 128 ntBASIC5.86□□□□□ -1.47
CAV3P56539 SNORA11E-201ENST00000408778 128 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AL662791.3-201ENST00000413771 776 ntBASIC5.86□□□□□ -1.47
CAV3P56539 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 AL161742.1-201ENST00000418154 584 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AL359633.1-201ENST00000421403 310 ntBASIC5.86□□□□□ -1.47
CAV3P56539 GAPDHP69-201ENST00000425504 1008 ntBASIC5.86□□□□□ -1.47
CAV3P56539 CHCHD3P1-201ENST00000425516 676 ntBASIC5.86□□□□□ -1.47
CAV3P56539 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CAV3P56539 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 FECHP1-201ENST00000431896 1214 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.86□□□□□ -1.47
CAV3P56539 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.86□□□□□ -1.47
CAV3P56539 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CAV3P56539 RPL23AP68-201ENST00000480924 445 ntBASIC5.86□□□□□ -1.47
CAV3P56539 RPL7L1P7-201ENST00000509986 724 ntBASIC5.86□□□□□ -1.47
CAV3P56539 DCAF13P2-201ENST00000514188 555 ntBASIC5.86□□□□□ -1.47
CAV3P56539 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 PHBP2-201ENST00000532859 806 ntBASIC5.86□□□□□ -1.47
CAV3P56539 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.86□□□□□ -1.47
CAV3P56539 OR4A6P-201ENST00000534364 970 ntBASIC5.86□□□□□ -1.47
CAV3P56539 FAM30C-201ENST00000561158 410 ntBASIC5.86□□□□□ -1.47
CAV3P56539 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CAV3P56539 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CAV3P56539 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC5.86□□□□□ -1.47
CAV3P56539 AC127024.8-201ENST00000623719 2094 ntBASIC5.86□□□□□ -1.47
CAV3P56539 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.86□□□□□ -1.47
CAV3P56539 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CAV3P56539 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CAV3P56539 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.86□□□□□ -1.47
CAV3P56539 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.85□□□□□ -1.47
CAV3P56539 CASC19-228ENST00000641414 1684 ntBASIC5.85□□□□□ -1.47
CAV3P56539 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.85□□□□□ -1.47
CAV3P56539 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.85□□□□□ -1.47
CAV3P56539 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CAV3P56539 RNA5SP188-201ENST00000362916 129 ntBASIC5.85□□□□□ -1.47
CAV3P56539 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 AL360271.1-201ENST00000395679 510 ntBASIC5.85□□□□□ -1.47
CAV3P56539 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.85□□□□□ -1.47
CAV3P56539 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CAV3P56539 RPL23AP18-201ENST00000416139 468 ntBASIC5.85□□□□□ -1.47
CAV3P56539 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.85□□□□□ -1.47
CAV3P56539 AL645936.2-201ENST00000430565 928 ntBASIC5.85□□□□□ -1.47
CAV3P56539 FTLP17-201ENST00000432567 525 ntBASIC5.85□□□□□ -1.47
CAV3P56539 RPL14P5-201ENST00000436474 730 ntBASIC5.85□□□□□ -1.47
CAV3P56539 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.85□□□□□ -1.47
CAV3P56539 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.85□□□□□ -1.47
CAV3P56539 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.85□□□□□ -1.47
CAV3P56539 GAPDHP53-201ENST00000458397 924 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms