Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 AL139384.2-201ENST00000613809 3590 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX2P48431 RNU4-39P-201ENST00000362455 127 ntBASIC6.02□□□□□ -1.45
SOX2P48431 SNORA27.3-201ENST00000364937 134 ntBASIC6.02□□□□□ -1.45
SOX2P48431 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 RN7SL213P-201ENST00000463482 317 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 OR2A3P-201ENST00000493774 953 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.02□□□□□ -1.45
SOX2P48431 AC021220.1-201ENST00000507445 630 ntBASIC6.02□□□□□ -1.45
SOX2P48431 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 RNU6-415P-201ENST00000516252 97 ntBASIC6.02□□□□□ -1.45
SOX2P48431 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 AC079866.1-201ENST00000534985 1220 ntBASIC6.02□□□□□ -1.45
SOX2P48431 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.02□□□□□ -1.45
SOX2P48431 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 AC068408.1-201ENST00000577406 1144 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX2P48431 AC008147.4-201ENST00000617570 1204 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC022960.3-201ENST00000619794 441 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC010872.1-201ENST00000624225 675 ntBASIC6.02□□□□□ -1.45
SOX2P48431 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 FGL2-202ENST00000637771 989 ntBASIC6.02□□□□□ -1.45
SOX2P48431 OR7E161P-202ENST00000641994 1033 ntBASIC6.02□□□□□ -1.45
SOX2P48431 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SOX2P48431 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
SOX2P48431 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX2P48431 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX2P48431 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 AC013488.1-201ENST00000526618 1838 ntBASIC6.02□□□□□ -1.45
SOX2P48431 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 AC129502.1-201ENST00000623261 1654 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC009120.2-204ENST00000621548 2032 ntBASIC6.01□□□□□ -1.45
SOX2P48431 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 AC125232.1-201ENST00000452554 1408 ntBASIC6.01□□□□□ -1.45
SOX2P48431 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX2P48431 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX2P48431 MIR152-201ENST00000385212 87 ntBASIC6.01□□□□□ -1.45
SOX2P48431 RNU11-6P-201ENST00000391127 133 ntBASIC6.01□□□□□ -1.45
SOX2P48431 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 CES5AP1-201ENST00000400418 859 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX2P48431 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 KRT18P53-201ENST00000431919 117 ntBASIC6.01□□□□□ -1.45
SOX2P48431 RPL22P11-201ENST00000434894 385 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 AC073072.2-201ENST00000447425 348 ntBASIC6.01□□□□□ -1.45
SOX2P48431 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 AC010878.1-201ENST00000456500 1047 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms