Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL139805.2-201ENST00000455305 2433 ntBASIC6.44□□□□□ -1.38
CD40P25942 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 OR56A4-201ENST00000330728 1209 ntBASIC6.44□□□□□ -1.38
CD40P25942 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 RNA5SP238-201ENST00000365464 120 ntBASIC6.44□□□□□ -1.38
CD40P25942 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 AL139806.1-201ENST00000403057 1002 ntBASIC6.44□□□□□ -1.38
CD40P25942 TYMSP1-201ENST00000407851 869 ntBASIC6.44□□□□□ -1.38
CD40P25942 RNU4-22P-201ENST00000411058 166 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 AL390840.1-201ENST00000420303 988 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.44□□□□□ -1.38
CD40P25942 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 AL138479.1-201ENST00000426913 484 ntBASIC6.44□□□□□ -1.38
CD40P25942 AF274573.1-201ENST00000430535 494 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC005040.1-201ENST00000437783 482 ntBASIC6.44□□□□□ -1.38
CD40P25942 AL138787.1-202ENST00000437804 898 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC123904.1-201ENST00000441072 368 ntBASIC6.44□□□□□ -1.38
CD40P25942 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.44□□□□□ -1.38
CD40P25942 AC023245.1-201ENST00000468501 517 ntBASIC6.44□□□□□ -1.38
CD40P25942 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 UGT2A3P7-201ENST00000510485 734 ntBASIC6.44□□□□□ -1.38
CD40P25942 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.44□□□□□ -1.38
CD40P25942 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 IGKV2-29-201ENST00000521304 372 ntBASIC6.44□□□□□ -1.38
CD40P25942 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.44□□□□□ -1.38
CD40P25942 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 OR6M3P-201ENST00000531567 700 ntBASIC6.44□□□□□ -1.38
CD40P25942 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.44□□□□□ -1.38
CD40P25942 EGLN3P1-201ENST00000541727 720 ntBASIC6.44□□□□□ -1.38
CD40P25942 RN7SL689P-201ENST00000577215 297 ntBASIC6.44□□□□□ -1.38
CD40P25942 CCDC58P1-201ENST00000578567 430 ntBASIC6.44□□□□□ -1.38
CD40P25942 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 AC090241.1-201ENST00000587732 621 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 VN1R78P-201ENST00000597393 564 ntBASIC6.44□□□□□ -1.38
CD40P25942 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 SNX29P2-204ENST00000603801 875 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC023206.1-201ENST00000605824 298 ntBASIC6.44□□□□□ -1.38
CD40P25942 RN7SL778P-201ENST00000607160 297 ntBASIC6.44□□□□□ -1.38
CD40P25942 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 pRNA.12-201ENST00000614353 90 ntBASIC6.44□□□□□ -1.38
CD40P25942 pRNA.3-201ENST00000615048 90 ntBASIC6.44□□□□□ -1.38
CD40P25942 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 AC233280.20-201ENST00000637412 416 ntBASIC6.44□□□□□ -1.38
CD40P25942 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.44□□□□□ -1.38
CD40P25942 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CD40P25942 AC090132.1-201ENST00000524071 1480 ntBASIC6.44□□□□□ -1.38
CD40P25942 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 QRSL1P3-201ENST00000552666 1316 ntBASIC6.44□□□□□ -1.38
CD40P25942 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CD40P25942 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CD40P25942 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 DDX10P2-201ENST00000417796 2614 ntBASIC6.44□□□□□ -1.38
CD40P25942 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD40P25942 NEPNP-201ENST00000404786 1371 ntBASIC6.44□□□□□ -1.38
CD40P25942 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.44□□□□□ -1.38
CD40P25942 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 AL137918.1-201ENST00000624542 1922 ntBASIC6.43□□□□□ -1.38
CD40P25942 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 RN7SKP257-201ENST00000364525 309 ntBASIC6.43□□□□□ -1.38
CD40P25942 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
CD40P25942 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 MIR575-201ENST00000385013 94 ntBASIC6.43□□□□□ -1.38
CD40P25942 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CD40P25942 AL049545.1-201ENST00000401856 572 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms