Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CDY9P-201ENST00000451397 1580 ntBASIC6.68□□□□□ -1.34
CDH3P22223 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 CDY7P-201ENST00000429883 1604 ntBASIC6.68□□□□□ -1.34
CDH3P22223 DLEU2L-201ENST00000371086 3555 ntBASIC6.68□□□□□ -1.34
CDH3P22223 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
CDH3P22223 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH3P22223 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 AC004023.1-201ENST00000561473 1744 ntBASIC6.67□□□□□ -1.34
CDH3P22223 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 AC132219.2-201ENST00000624416 2327 ntBASIC6.67□□□□□ -1.34
CDH3P22223 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.67□□□□□ -1.34
CDH3P22223 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 AC022034.1-201ENST00000512867 2156 ntBASIC6.67□□□□□ -1.34
CDH3P22223 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 AL079341.1-201ENST00000404701 1207 ntBASIC6.67□□□□□ -1.34
CDH3P22223 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.67□□□□□ -1.34
CDH3P22223 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 AL034399.1-201ENST00000451535 380 ntBASIC6.67□□□□□ -1.34
CDH3P22223 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.67□□□□□ -1.34
CDH3P22223 RN7SL372P-201ENST00000461982 298 ntBASIC6.67□□□□□ -1.34
CDH3P22223 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 RN7SL790P-201ENST00000474043 298 ntBASIC6.67□□□□□ -1.34
CDH3P22223 RPS4XP17-201ENST00000479057 754 ntBASIC6.67□□□□□ -1.34
CDH3P22223 RN7SL379P-201ENST00000479912 293 ntBASIC6.67□□□□□ -1.34
CDH3P22223 RN7SL350P-201ENST00000492591 299 ntBASIC6.67□□□□□ -1.34
CDH3P22223 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 MTCYBP44-201ENST00000514835 823 ntBASIC6.67□□□□□ -1.34
CDH3P22223 MRPS5P3-201ENST00000515577 166 ntBASIC6.67□□□□□ -1.34
CDH3P22223 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 PPIAP6-201ENST00000557078 499 ntBASIC6.67□□□□□ -1.34
CDH3P22223 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH3P22223 AC007255.2-201ENST00000604053 631 ntBASIC6.67□□□□□ -1.34
CDH3P22223 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.67□□□□□ -1.34
CDH3P22223 AC005858.3-201ENST00000624756 589 ntBASIC6.67□□□□□ -1.34
CDH3P22223 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH3P22223 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
CDH3P22223 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH3P22223 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
CDH3P22223 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.66□□□□□ -1.34
CDH3P22223 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CDH3P22223 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDH3P22223 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH3P22223 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH3P22223 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CDH3P22223 RNA5SP152-201ENST00000365184 110 ntBASIC6.66□□□□□ -1.34
CDH3P22223 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH3P22223 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
CDH3P22223 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
CDH3P22223 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 RBMY2BP-202ENST00000451071 1156 ntBASIC6.66□□□□□ -1.34
CDH3P22223 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 RPSAP24-201ENST00000461543 873 ntBASIC6.66□□□□□ -1.34
CDH3P22223 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH3P22223 RN7SL655P-201ENST00000486087 298 ntBASIC6.66□□□□□ -1.34
CDH3P22223 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH3P22223 RPS4XP23-201ENST00000487801 237 ntBASIC6.66□□□□□ -1.34
CDH3P22223 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH3P22223 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.66□□□□□ -1.34
CDH3P22223 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.66□□□□□ -1.34
CDH3P22223 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.66□□□□□ -1.34
CDH3P22223 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.66□□□□□ -1.34
CDH3P22223 NXPE2P1-201ENST00000543705 726 ntBASIC6.66□□□□□ -1.34
CDH3P22223 AC027796.1-201ENST00000575593 512 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms