Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM1P09493 ST13P2-201ENST00000438916 1109 ntBASIC7.29□□□□□ -1.24
TPM1P09493 DBIL5P2-201ENST00000443827 253 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM1P09493 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM1P09493 SNX18P23-201ENST00000510867 677 ntBASIC7.29□□□□□ -1.24
TPM1P09493 DCAF13P2-201ENST00000514188 555 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AP005639.1-201ENST00000526939 192 ntBASIC7.29□□□□□ -1.24
TPM1P09493 PHBP2-201ENST00000532859 806 ntBASIC7.29□□□□□ -1.24
TPM1P09493 NDUFA3P1-201ENST00000588007 252 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AC011921.2-201ENST00000589465 152 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AC013489.3-201ENST00000623274 517 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AC073263.3-201ENST00000624449 858 ntBASIC7.29□□□□□ -1.24
TPM1P09493 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TPM1P09493 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
TPM1P09493 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
TPM1P09493 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
TPM1P09493 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM1P09493 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
TPM1P09493 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 MIR128-2-201ENST00000384893 84 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AC116036.1-201ENST00000412199 367 ntBASIC7.28□□□□□ -1.24
TPM1P09493 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 AC019080.2-201ENST00000453859 394 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 AC021146.11-201ENST00000503319 491 ntBASIC7.28□□□□□ -1.24
TPM1P09493 GAPDHP38-201ENST00000503632 1002 ntBASIC7.28□□□□□ -1.24
TPM1P09493 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TPM1P09493 AC017007.1-201ENST00000511960 415 ntBASIC7.28□□□□□ -1.24
TPM1P09493 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.28□□□□□ -1.24
TPM1P09493 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM1P09493 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 NDUFA3P2-201ENST00000531434 232 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM1P09493 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM1P09493 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.28□□□□□ -1.24
TPM1P09493 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 AC092032.1-201ENST00000603090 165 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AC005070.2-201ENST00000604391 260 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AC009237.12-201ENST00000604755 742 ntBASIC7.28□□□□□ -1.24
TPM1P09493 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.28□□□□□ -1.24
TPM1P09493 AC010320.5-201ENST00000619124 676 ntBASIC7.28□□□□□ -1.24
TPM1P09493 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.28□□□□□ -1.24
TPM1P09493 AL591135.1-201ENST00000401578 5914 ntBASIC7.28□□□□□ -1.24
TPM1P09493 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.28□□□□□ -1.24
TPM1P09493 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
TPM1P09493 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TPM1P09493 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.28□□□□□ -1.24
TPM1P09493 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
TPM1P09493 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TPM1P09493 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
TPM1P09493 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM1P09493 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM1P09493 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
TPM1P09493 SNORA70.3-201ENST00000365075 132 ntBASIC7.27□□□□□ -1.25
TPM1P09493 U3.14-201ENST00000365363 227 ntBASIC7.27□□□□□ -1.25
TPM1P09493 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM1P09493 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM1P09493 NHP2P2-201ENST00000396362 460 ntBASIC7.27□□□□□ -1.25
TPM1P09493 RNA5SP177-201ENST00000410122 107 ntBASIC7.27□□□□□ -1.25
TPM1P09493 RN7SKP296-201ENST00000411185 341 ntBASIC7.27□□□□□ -1.25
TPM1P09493 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 AC109638.1-201ENST00000417406 326 ntBASIC7.27□□□□□ -1.25
TPM1P09493 RPS7P12-201ENST00000422385 582 ntBASIC7.27□□□□□ -1.25
TPM1P09493 SNRPEP5-201ENST00000425442 278 ntBASIC7.27□□□□□ -1.25
TPM1P09493 AC134879.1-201ENST00000426062 394 ntBASIC7.27□□□□□ -1.25
TPM1P09493 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM1P09493 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM1P09493 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.27□□□□□ -1.25
TPM1P09493 AL928654.1-201ENST00000476081 354 ntBASIC7.27□□□□□ -1.25
TPM1P09493 AC092824.1-201ENST00000483524 576 ntBASIC7.27□□□□□ -1.25
TPM1P09493 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM1P09493 AC026774.2-201ENST00000513990 1098 ntBASIC7.27□□□□□ -1.25
TPM1P09493 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM1P09493 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM1P09493 AC005899.7-201ENST00000618199 588 ntBASIC7.27□□□□□ -1.25
TPM1P09493 pRNA.9-201ENST00000618609 89 ntBASIC7.27□□□□□ -1.25
TPM1P09493 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.27□□□□□ -1.25
TPM1P09493 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM1P09493 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms