Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 RPL23AP68-201ENST00000480924 445 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 GGTA1P-204ENST00000488429 1104 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 AC083906.1-201ENST00000509298 406 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 DCAF13P2-201ENST00000514188 555 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 RN7SKP11-201ENST00000517018 287 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CXCL1P09341 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.06□□□□□ -1.6
CXCL1P09341 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 SIGLEC31P-201ENST00000594237 551 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CXCL1P09341 AC138904.2-201ENST00000614412 107 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 AC016542.3-201ENST00000623520 619 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 AC211433.3-201ENST00000623770 375 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 MTCO1P25-201ENST00000414449 1799 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL1P09341 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 AL356361.1-201ENST00000400943 1459 ntBASIC5.06□□□□□ -1.6
CXCL1P09341 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL1P09341 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL1P09341 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL1P09341 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 PPBPP2-201ENST00000513150 1362 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CXCL1P09341 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL1P09341 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL355488.2-201ENST00000609909 2850 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 RNA5SP297-201ENST00000391029 113 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AL050335.1-201ENST00000396909 869 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 OR4F7P-201ENST00000402444 931 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 OR4F1P-201ENST00000405102 938 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 OR4F2P-201ENST00000424047 938 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 GAPDHP20-201ENST00000444107 1007 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 HSPA8P3-201ENST00000449300 780 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AL591379.2-201ENST00000450223 397 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.05□□□□□ -1.6
CXCL1P09341 RPS20P23-201ENST00000461683 354 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.05□□□□□ -1.6
CXCL1P09341 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 RN7SL849P-201ENST00000485236 295 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.05□□□□□ -1.6
CXCL1P09341 AC023794.3-204ENST00000510754 236 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 SNORA70.11-201ENST00000515987 138 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 SNORA70.13-201ENST00000516116 138 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 AC044860.3-201ENST00000559957 368 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL1P09341 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.05□□□□□ -1.6
CXCL1P09341 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 RPL17P3-201ENST00000605695 525 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 FAM27E3-202ENST00000614611 340 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AP000577.1-201ENST00000624366 878 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 OR7E161P-202ENST00000641994 1033 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CXCL1P09341 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CXCL1P09341 MAPK10-338ENST00000641647 3362 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 CASC19-228ENST00000641414 1684 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL1P09341 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CXCL1P09341 RACGAP1P-201ENST00000550663 1879 ntBASIC5.05□□□□□ -1.6
CXCL1P09341 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms