Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AL353743.3-201ENST00000442109 1468 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RNA5SP448-201ENST00000363151 111 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RNU6-354P-201ENST00000383862 107 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RNU6-610P-201ENST00000384264 107 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 HMGB3P19-201ENST00000403971 560 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 UBE2V1P10-201ENST00000414685 269 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LINC01881-201ENST00000416103 412 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 NIFKP3-201ENST00000417799 865 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 OR7E36P-201ENST00000419933 954 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 DPPA2P1-201ENST00000428060 556 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 MTND2P21-201ENST00000436242 1042 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AL591379.2-201ENST00000450223 397 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC104389.2-201ENST00000450768 887 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 MTCO2P18-201ENST00000457151 658 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TDGF1P6-201ENST00000463873 448 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RN7SL332P-201ENST00000482163 254 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 DEFB109A-201ENST00000482450 265 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RN7SL205P-201ENST00000490174 284 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 RN7SL182P-201ENST00000496499 300 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC117383.2-201ENST00000514722 322 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 COX4I1P1-201ENST00000554239 509 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 COX6CP11-201ENST00000555293 229 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC095057.3-201ENST00000567102 1157 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 MIR4437-201ENST00000581331 60 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC007136.1-201ENST00000589141 199 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AP003465.2-201ENST00000602571 373 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC073387.2-201ENST00000604797 784 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SNORD91A-202ENST00000609620 191 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC007671.2-201ENST00000637344 619 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AC012360.3-201ENST00000610036 3449 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 CASC19-248ENST00000641674 1356 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC025040.2-201ENST00000558657 1852 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL606490.2-201ENST00000457562 1330 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC008498.2-201ENST00000624033 2322 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 RN7SKP211-201ENST00000363328 315 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 RN7SKP28-201ENST00000364770 305 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 SFR1P1-201ENST00000403720 688 ntBASIC6.3□□□□□ -1.4
SSBP3Q9BWW4 AL590143.1-201ENST00000405071 138 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms