Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC079178.2-201ENST00000439323 1624 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 LUZP4P1-201ENST00000415420 344 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CYP4F32P-201ENST00000426492 504 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 UBE2V1P6-201ENST00000430840 422 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CETN4P-201ENST00000432407 469 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 BX119917.1-201ENST00000432517 502 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SL372P-201ENST00000461982 298 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 RPS14P8-201ENST00000478778 369 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 RPS4XP23-201ENST00000487801 237 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 GTF2IP9-201ENST00000502460 301 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC008868.1-201ENST00000509786 737 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 EEF1B2P2-201ENST00000519625 676 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 MIR4312-201ENST00000579909 76 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 BNIP3P31-201ENST00000604515 566 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL161912.3-201ENST00000605404 628 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC073389.3-201ENST00000609434 935 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC026951.2-201ENST00000613847 241 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AC010608.3-201ENST00000625048 527 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CCDC150P1-201ENST00000537123 2215 ntBASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP1Q96SZ6 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 PCNPP4-201ENST00000414817 517 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 USP12PY-201ENST00000427677 1064 ntBASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP1Q96SZ6 Z99714.1-201ENST00000450463 807 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms