Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 AC092032.1-201ENST00000603090 165 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 AC137695.2-201ENST00000603123 754 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 AL136097.3-201ENST00000611097 505 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 AL356585.10-201ENST00000641883 123 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VMP1Q96GC9 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VMP1Q96GC9 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VMP1Q96GC9 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 AC061975.5-201ENST00000584928 1441 ntBASIC6.66□□□□□ -1.34
VMP1Q96GC9 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VMP1Q96GC9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VMP1Q96GC9 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.66□□□□□ -1.34
VMP1Q96GC9 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 RNA5SP114-201ENST00000363780 113 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 SNORA70.5-201ENST00000365519 135 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC024937.2-201ENST00000411669 1242 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 VDAC1P10-201ENST00000416715 891 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 SRP68P2-201ENST00000456184 254 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 BX323845.2-201ENST00000458382 234 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 RPSAP48-201ENST00000466509 889 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 AL591122.1-201ENST00000487348 492 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 ASNSP4-201ENST00000511103 447 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 SUMO2P19-201ENST00000518920 295 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 AP001646.2-201ENST00000528645 1156 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC023080.1-201ENST00000551663 931 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC009283.1-201ENST00000615852 645 ntBASIC6.65□□□□□ -1.34
VMP1Q96GC9 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
VMP1Q96GC9 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VMP1Q96GC9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
VMP1Q96GC9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.65□□□□□ -1.35
VMP1Q96GC9 CDY5P-201ENST00000411487 1580 ntBASIC6.65□□□□□ -1.35
VMP1Q96GC9 CDY9P-201ENST00000451397 1580 ntBASIC6.65□□□□□ -1.35
VMP1Q96GC9 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VMP1Q96GC9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
VMP1Q96GC9 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VMP1Q96GC9 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.65□□□□□ -1.35
VMP1Q96GC9 AL355377.1-201ENST00000621125 1653 ntBASIC6.65□□□□□ -1.35
VMP1Q96GC9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VMP1Q96GC9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 U3.48-201ENST00000363172 216 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 FAM204BP-201ENST00000369171 701 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 RN7SKP137-201ENST00000411074 307 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 MICG-208ENST00000416822 132 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 GSTA6P-201ENST00000424144 582 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 AL592114.2-201ENST00000440142 532 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.64□□□□□ -1.35
VMP1Q96GC9 RN7SL88P-201ENST00000480166 299 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC018639.1-201ENST00000492994 442 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AC105391.1-201ENST00000503155 1045 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 RPL7L1P7-201ENST00000509986 724 ntBASIC6.64□□□□□ -1.35
VMP1Q96GC9 AP004607.6-201ENST00000525033 1202 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms