Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AP004289.1-201ENST00000436307 2205 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AP002800.1-201ENST00000624982 2225 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AL023284.3-201ENST00000407767 334 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC116036.1-201ENST00000412199 367 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 IFNA12P-201ENST00000413147 571 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 GAPDHP57-201ENST00000424400 585 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC245884.2-201ENST00000426257 404 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 PAICSP2-201ENST00000429118 1150 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AF274573.1-201ENST00000430535 494 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 GOT2P2-201ENST00000450663 1251 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 MEF2AP1-201ENST00000454867 863 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC016489.1-201ENST00000461109 375 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 RPSAP24-201ENST00000461543 873 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SL213P-201ENST00000463482 317 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC092824.1-201ENST00000483524 576 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 NACAP6-201ENST00000509572 622 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC016839.1-201ENST00000578162 867 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AL034374.2-201ENST00000605281 548 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 TTC41P-205ENST00000551270 3963 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC012078.1-201ENST00000405035 1646 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 DLEU2L-201ENST00000371086 3555 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC010624.4-201ENST00000597606 1351 ntBASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC71LQ8N9Z2 AC102941.1-201ENST00000567616 1537 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 RNU1-55P-201ENST00000365510 158 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 SNORA70.9-201ENST00000384370 135 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 RNU6-233P-201ENST00000410845 141 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC009237.9-201ENST00000414800 347 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AL645936.2-201ENST00000430565 928 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 VN1R38P-201ENST00000450265 887 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 SCDP1-201ENST00000455244 1081 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC012123.2-201ENST00000485809 248 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 ADI1P2-201ENST00000514945 429 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SKP67-201ENST00000515905 235 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AP003084.1-201ENST00000524828 742 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 OR7E161P-201ENST00000533722 967 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SL664P-201ENST00000584239 305 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC011921.2-201ENST00000589465 152 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AL161420.1-201ENST00000619393 264 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC087072.2-201ENST00000621060 682 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms