Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC006120.1-201ENST00000579375 546 ntBASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AL021878.2-201ENST00000602718 399 ntBASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC243772.3-202ENST00000609662 1148 ntBASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 CGA-202ENST00000610310 615 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCUBE3Q8IX30 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 OR51E1-202ENST00000530215 2942 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC002540.1-201ENST00000625023 1349 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 OR9G4-201ENST00000302957 984 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 RNU6-697P-201ENST00000363348 107 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 Y_RNA.356-201ENST00000365475 113 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CCNG1P1-201ENST00000406783 885 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC006457.1-201ENST00000420733 392 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC104850.1-201ENST00000435940 476 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 YWHABP1-201ENST00000445359 727 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AL050341.1-201ENST00000447743 313 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 OR6K1P-201ENST00000456766 971 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC013267.1-201ENST00000458227 267 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 VPS26AP1-201ENST00000483197 979 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC105252.1-201ENST00000503089 286 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 HMGN1P13-201ENST00000505795 138 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC010587.2-201ENST00000511727 448 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 LRRC34P2-201ENST00000514850 553 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 RNU6-327P-201ENST00000516270 127 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 IGLV7-35-201ENST00000523314 340 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AP003072.1-201ENST00000531740 145 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 OR7E15P-201ENST00000533484 967 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 SLC25A3P2-201ENST00000547720 880 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 BNIP3P26-201ENST00000600827 554 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC104117.5-201ENST00000606195 547 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC239859.6-201ENST00000622095 213 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AC009093.6-201ENST00000622268 553 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms