Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC005618.1-201ENST00000606901 3148 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC104837.1-201ENST00000444644 1587 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL157713.1-201ENST00000379752 1531 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 RN7SKP211-201ENST00000363328 315 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 SNORA51.7-201ENST00000384171 134 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 CLIC4P3-201ENST00000422221 752 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 GAPDHP73-201ENST00000423411 1007 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL138479.1-201ENST00000426913 484 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AL034399.1-201ENST00000451535 380 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 SEPT7P3-201ENST00000455017 621 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 OR7L1P-201ENST00000456181 380 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 RN7SL58P-201ENST00000473445 294 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 CR383656.1-201ENST00000484916 377 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC074386.1-206ENST00000487102 761 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 NPM1P52-201ENST00000518264 846 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 IGKV2-29-201ENST00000521304 372 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AP004607.6-201ENST00000525033 1202 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 MIR4301-201ENST00000577203 66 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC009303.3-201ENST00000591103 736 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 EXOSC3P2-201ENST00000594464 497 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AP002884.5-201ENST00000595053 1132 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC023206.1-201ENST00000605824 298 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 BX005195.1-201ENST00000618097 1198 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 AC034229.6-201ENST00000623704 224 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 SNORA43.5-201ENST00000631270 138 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 TRIM60P14-201ENST00000513444 1419 ntBASIC6.06□□□□□ -1.44
C11orf88Q6PI97 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
C11orf88Q6PI97 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 AL391261.1-201ENST00000555712 1479 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 AC007842.1-201ENST00000597336 2039 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 AC074375.1-201ENST00000372993 192 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 NUS1P4-201ENST00000401550 585 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 SNORA3.1-201ENST00000408166 111 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
C11orf88Q6PI97 FDPSP6-201ENST00000425091 512 ntBASIC6.05□□□□□ -1.44
C11orf88Q6PI97 ARAFP2-201ENST00000440565 559 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms