Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC026774.2-201ENST00000513990 1098 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 OR52H2P-201ENST00000514607 902 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC096661.1-201ENST00000515870 822 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 IGKV2D-38-201ENST00000518423 240 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL445383.1-201ENST00000554689 874 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC091304.4-201ENST00000565703 620 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC090241.1-201ENST00000587732 621 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL157899.1-201ENST00000604110 936 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC023206.1-201ENST00000605824 298 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 PTCHD3P1-201ENST00000612350 537 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC007204.1-201ENST00000621794 555 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC005858.3-201ENST00000624756 589 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC025809.2-201ENST00000625085 1802 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AC122713.2-201ENST00000624942 3335 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 AL139384.2-201ENST00000613809 3590 ntBASIC6.61□□□□□ -1.35
ZNF549Q6P9A3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC005618.1-201ENST00000606901 3148 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 UBBP1-201ENST00000392399 473 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL079341.1-201ENST00000404701 1207 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC087499.3-202ENST00000441215 1173 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL158214.1-201ENST00000444423 404 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC022616.2-201ENST00000523185 300 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 RBMS2P1-201ENST00000525031 1226 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 FCGR1CP-201ENST00000579737 1127 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AC005520.3-201ENST00000602874 370 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AL359694.2-201ENST00000567753 1615 ntBASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
ZNF549Q6P9A3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ZNF812P-201ENST00000457674 1694 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 AL033543.1-201ENST00000623440 13454 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 MAPK10-357ENST00000641831 2858 ntBASIC6.59□□□□□ -1.35
ZNF549Q6P9A3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms