Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC138207.8-204ENST00000579588 527 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 RPL29P33-201ENST00000587474 316 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC091133.5-201ENST00000603088 301 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AL513218.1-201ENST00000606527 391 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC099654.11-201ENST00000638857 294 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AP001157.1-201ENST00000550837 2339 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC217777.1-201ENST00000570034 1471 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CYP2G2P-201ENST00000594920 1485 ntBASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3F3CQ6NXT2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC132219.2-201ENST00000624416 2327 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 RNA5SP140-201ENST00000364524 92 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 SNORA7A-201ENST00000384765 139 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 VIM2P-201ENST00000402383 1294 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 RN7SKP271-201ENST00000410528 320 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 UBTFL2-201ENST00000411859 1191 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 RPS18P1-201ENST00000447840 458 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC133965.1-201ENST00000452984 354 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 PABPC1P1-201ENST00000506347 591 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ANP32BP1-202ENST00000568553 737 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC087575.1-201ENST00000585087 229 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 CYCSP1-201ENST00000604815 315 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AL390877.1-201ENST00000605704 214 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 GAPDHP41-201ENST00000613707 975 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AP003175.1-201ENST00000641383 6658 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 MAPK10-357ENST00000641831 2858 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 AL451064.2-201ENST00000623514 1654 ntBASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
H3F3CQ6NXT2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms