Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC012005.2-201ENST00000624333 397 ntBASIC6.24□□□□□ -1.41
RFC3P40938 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 AC183089.2-201ENST00000637931 916 ntBASIC6.24□□□□□ -1.41
RFC3P40938 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC3P40938 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 AL161901.1-201ENST00000624954 3425 ntBASIC6.24□□□□□ -1.41
RFC3P40938 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
RFC3P40938 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RFC3P40938 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFC3P40938 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
RFC3P40938 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC3P40938 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC3P40938 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFC3P40938 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC3P40938 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.24□□□□□ -1.41
RFC3P40938 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RFC3P40938 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
RFC3P40938 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 OR4C1P-202ENST00000641065 1569 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC127070.3-201ENST00000503695 3263 ntBASIC6.23□□□□□ -1.41
RFC3P40938 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFC3P40938 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 MAPK10-379ENST00000642013 1385 ntBASIC6.23□□□□□ -1.41
RFC3P40938 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 RPL24P4-201ENST00000326586 421 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RPL9P21-201ENST00000392269 505 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC121334.1-201ENST00000396414 802 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 RN7SKP232-201ENST00000410170 290 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RN7SKP146-201ENST00000410242 334 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RN7SKP221-201ENST00000410420 301 ntBASIC6.23□□□□□ -1.41
RFC3P40938 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 NMNAT1P3-201ENST00000457517 888 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC004890.1-201ENST00000461005 181 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC135721.2-201ENST00000464237 300 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC083806.1-201ENST00000468934 316 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AP003385.3-201ENST00000472498 287 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RPS7P11-201ENST00000484240 586 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 AC055733.3-201ENST00000505214 523 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RNA5SP278-201ENST00000517055 102 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 SUMO2P19-201ENST00000518920 295 ntBASIC6.23□□□□□ -1.41
RFC3P40938 SETP17-201ENST00000534163 817 ntBASIC6.23□□□□□ -1.41
RFC3P40938 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.23□□□□□ -1.41
RFC3P40938 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 MIR6823-201ENST00000622118 61 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC017037.4-201ENST00000624526 826 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 CDY7P-201ENST00000429883 1604 ntBASIC6.23□□□□□ -1.41
RFC3P40938 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 OFD1P17-201ENST00000437639 3018 ntBASIC6.23□□□□□ -1.41
RFC3P40938 AP003486.1-201ENST00000525716 3994 ntBASIC6.23□□□□□ -1.41
RFC3P40938 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFC3P40938 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 ENO1P4-201ENST00000416471 1785 ntBASIC6.23□□□□□ -1.41
RFC3P40938 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
RFC3P40938 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RFC3P40938 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFC3P40938 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFC3P40938 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.22□□□□□ -1.41
RFC3P40938 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RFC3P40938 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.22□□□□□ -1.41
RFC3P40938 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFC3P40938 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.22□□□□□ -1.41
RFC3P40938 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms