Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
ERCC3P19447 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 OR11H13P-201ENST00000359695 979 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 RNU5E-10P-201ENST00000363506 118 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC234772.1-201ENST00000377927 937 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 RNU6-468P-201ENST00000384003 109 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ERCC3P19447 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ERCC3P19447 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ERCC3P19447 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 AC244505.2-201ENST00000435089 759 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 MTCYBP11-201ENST00000447254 1109 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC009244.1-201ENST00000450566 258 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.53□□□□□ -1.04
ERCC3P19447 AC096992.1-201ENST00000459808 709 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC115223.1-201ENST00000466377 870 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 CBX1P5-201ENST00000475330 559 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 AC005550.2-201ENST00000476382 318 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC009153.1-201ENST00000485799 496 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 HMGB1P38-201ENST00000490557 577 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 PRELID3BP5-201ENST00000508612 460 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 SETP21-201ENST00000514799 892 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 RN7SKP2-201ENST00000517003 319 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 AC084824.2-201ENST00000548906 345 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.53□□□□□ -1.04
ERCC3P19447 MTCYBP23-201ENST00000558717 1102 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.53□□□□□ -1.04
ERCC3P19447 AL606834.3-201ENST00000602615 496 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 COX6CP16-201ENST00000603667 216 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC093424.1-201ENST00000604999 338 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 uc_338.21-201ENST00000622458 147 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.53□□□□□ -1.04
ERCC3P19447 AC006927.2-201ENST00000639256 389 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.53□□□□□ -1.04
ERCC3P19447 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 ZNF90P1-201ENST00000480493 1951 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 AL512353.3-201ENST00000417517 1326 ntBASIC8.53□□□□□ -1.04
ERCC3P19447 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
ERCC3P19447 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.52□□□□□ -1.04
ERCC3P19447 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 COL6A4P1-202ENST00000487147 4317 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
ERCC3P19447 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.52□□□□□ -1.05
ERCC3P19447 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
ERCC3P19447 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
ERCC3P19447 RNU6-316P-201ENST00000391027 107 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 RNU6-796P-201ENST00000391086 107 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AL590143.1-201ENST00000405071 138 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.52□□□□□ -1.05
ERCC3P19447 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 AC134879.1-201ENST00000426062 394 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC092634.2-201ENST00000428146 1010 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 AC027124.1-201ENST00000440852 466 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 RN7SL392P-201ENST00000473024 299 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 RPL21P47-201ENST00000483696 477 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 EIF1P7-201ENST00000487533 337 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC008496.1-201ENST00000509131 295 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC021146.7-201ENST00000509604 775 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 RFESD-208ENST00000513950 464 ntTSL 5 BASIC8.52□□□□□ -1.05
ERCC3P19447 RN7SKP287-201ENST00000516546 266 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 OR5D2P-201ENST00000524390 911 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AP003084.1-201ENST00000524828 742 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC8.52□□□□□ -1.05
ERCC3P19447 HMGN1P26-201ENST00000558737 303 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC010735.1-201ENST00000567305 1026 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 RPP40P2-201ENST00000603596 712 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms