Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ACTG1P22-201ENST00000603793 1099 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL356986.1-201ENST00000604085 341 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL683813.2-201ENST00000605245 502 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL137000.1-201ENST00000610528 1244 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AP001885.1-201ENST00000621658 558 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AC006453.3-201ENST00000635891 377 ntBASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RSPO3Q9BXY4 AL157831.2-201ENST00000564681 3095 ntBASIC6.09□□□□□ -1.44
RSPO3Q9BXY4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.09□□□□□ -1.44
RSPO3Q9BXY4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
RSPO3Q9BXY4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.09□□□□□ -1.44
RSPO3Q9BXY4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RN7SKP189-201ENST00000365042 330 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RNU1-46P-201ENST00000384425 164 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 MIR187-201ENST00000385062 109 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 UBBP1-201ENST00000392399 473 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RNA5SP115-201ENST00000411160 107 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RN7SKP296-201ENST00000411185 341 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC092646.1-201ENST00000427142 901 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 FECHP1-201ENST00000431896 1214 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 OSTCP2-201ENST00000437956 444 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AL592114.2-201ENST00000440142 532 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 CCNJP2-201ENST00000457810 1163 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RPS26P11-201ENST00000463445 348 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RPS26P6-201ENST00000475156 348 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 H3F3AP3-201ENST00000497682 407 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 RN7SKP64-201ENST00000517206 328 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 MIR4301-201ENST00000577203 66 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 BUB1P1-201ENST00000603541 607 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 Z93930.3-201ENST00000607919 749 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AP003108.4-201ENST00000623917 878 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC027559.1-201ENST00000636288 271 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 AC007998.4-201ENST00000612496 2533 ntBASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RSPO3Q9BXY4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AL049697.3-201ENST00000406493 982 ntBASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AKR1B10P1-201ENST00000425765 942 ntBASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AC073476.1-201ENST00000452854 407 ntBASIC6.07□□□□□ -1.44
RSPO3Q9BXY4 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms