Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 OR7E1P-201ENST00000533891 958 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 MIR4786-201ENST00000583954 80 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC006116.6-201ENST00000593258 1103 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC093388.1-201ENST00000609166 430 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC004241.2-201ENST00000614562 444 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC243830.3-201ENST00000616810 376 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC010624.4-201ENST00000597606 1351 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC119674.1-213ENST00000641177 1386 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 SNORA70.5-201ENST00000365519 135 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 RNU1-46P-201ENST00000384425 164 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 DBIL5P2-201ENST00000443827 253 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 SETP4-201ENST00000455717 868 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 RN7SL228P-201ENST00000470060 303 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC021146.11-201ENST00000503319 491 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 NACAP6-201ENST00000509572 622 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 OR5M4P-201ENST00000529436 925 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 RN7SL270P-201ENST00000579643 281 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 MIR3689C-201ENST00000581239 72 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 BOLA2P1-201ENST00000584794 232 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AC122710.3-201ENST00000606566 541 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 AL161420.1-201ENST00000619393 264 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 SNORA16A-202ENST00000628458 135 ntBASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC28BQ9BUN5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 MIR614-201ENST00000385082 90 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 RPS3AP5-201ENST00000389400 821 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 RNU6-316P-201ENST00000391027 107 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL050335.1-201ENST00000396909 869 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL049697.3-201ENST00000406493 982 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 GAPDHP55-201ENST00000423136 803 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 CYP4F34P-201ENST00000425951 481 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL354714.5-201ENST00000450131 590 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC008620.1-201ENST00000468453 592 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms