Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SKP148-201ENST00000410179 275 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AL672212.1-201ENST00000422246 400 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 RPL3P11-201ENST00000434028 1146 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 SETP8-201ENST00000435341 628 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 HMGN1P6-201ENST00000438508 291 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 MTCO3P43-201ENST00000440974 771 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 MTND2P22-201ENST00000444325 1033 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ART2BP-201ENST00000453501 499 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 BOLA3P3-201ENST00000505182 232 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC106806.2-201ENST00000509365 500 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC091515.1-201ENST00000548110 679 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC087888.1-201ENST00000550884 1254 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC105036.1-201ENST00000566222 271 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC111186.1-201ENST00000604684 130 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 KATNBL1P1-201ENST00000605192 748 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 U91328.4-201ENST00000608919 517 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AP005212.4-201ENST00000614206 710 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC090116.1-201ENST00000615679 446 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 OR4G3P-201ENST00000633500 913 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC068137.4-201ENST00000638485 296 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 AC092821.2-201ENST00000545710 2042 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC009220.2-201ENST00000489759 1751 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ATP5BP1-201ENST00000411980 1574 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 PPIAP26-201ENST00000377951 522 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 RNA5SP176-201ENST00000390956 110 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AL365338.1-201ENST00000422282 858 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 USP9YP28-201ENST00000435142 589 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AP000805.1-201ENST00000471604 784 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 PPP1R2P6-201ENST00000478565 588 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 RPL12P7-201ENST00000493832 494 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 RNA5SP278-201ENST00000517055 102 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AL109628.1-201ENST00000556877 366 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ULK4P1-202ENST00000565174 503 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC010287.1-201ENST00000566916 357 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF92P3-201ENST00000596594 954 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC005229.3-201ENST00000603438 323 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC087683.2-201ENST00000611384 326 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 MRPL57P3-201ENST00000619218 176 ntBASIC7.26□□□□□ -1.25
CDK5RAP1Q96SZ6 AC011471.4-201ENST00000638271 216 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 490.2 ms