Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 IL24-207ENST00000611909 1621 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AL590763.1-201ENST00000398297 1545 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC022905.1-201ENST00000503430 3048 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 Z97989.1-201ENST00000531702 2421 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC103591.2-201ENST00000265259 766 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 SNORA74A-201ENST00000364089 198 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 OR3D1P-201ENST00000438288 955 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 CBX1P2-201ENST00000453841 458 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 RN7SL269P-201ENST00000467795 305 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC008953.1-201ENST00000497334 318 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC006499.3-201ENST00000506077 748 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 OR5M14P-201ENST00000506803 618 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 OR9L1P-201ENST00000529493 933 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 SNORA11-201ENST00000408789 128 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 AL139148.1-201ENST00000427122 680 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 GEMIN2P1-201ENST00000454246 752 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 AL008723.3-201ENST00000608926 449 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 AC092724.1-201ENST00000624623 3397 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 CTAGE11P-201ENST00000451540 2353 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 SNORA64.1-201ENST00000362600 132 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 AL354794.2-201ENST00000424795 1248 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 AC091685.2-201ENST00000454924 864 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 AC103563.5-201ENST00000455643 364 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 AC005532.2-201ENST00000467154 373 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 AL121579.2-201ENST00000555466 590 ntBASIC5.15□□□□□ -1.58
VPS13CQ709C8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.15□□□□□ -1.58
VPS13CQ709C8 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS13CQ709C8 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 ZNF619P1-201ENST00000446539 752 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 RN7SL870P-201ENST00000460111 296 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 RN7SL329P-201ENST00000467740 299 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 RN7SL547P-201ENST00000490793 290 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AL731566.2-201ENST00000618971 317 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 Z97832.2-201ENST00000605896 4261 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 AC092725.2-201ENST00000567658 1389 ntBASIC5.15□□□□□ -1.59
VPS13CQ709C8 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms