Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CX3CL1P78423 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CDY19P-201ENST00000411668 1613 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 CDY18P-201ENST00000438294 1609 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CX3CL1P78423 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 QRSL1P3-201ENST00000552666 1316 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CX3CL1P78423 SOD1P1-201ENST00000407803 440 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 MTND4LP21-201ENST00000415303 295 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 DUTP4-201ENST00000424782 475 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 TRIM60P13-201ENST00000432350 1283 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.55□□□□□ -1.52
CX3CL1P78423 SRP68P2-201ENST00000456184 254 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 RN7SL456P-201ENST00000469290 295 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC093827.1-201ENST00000480094 861 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AP002981.1-201ENST00000517692 975 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 KCTD9P6-201ENST00000522306 950 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 PDCL3P1-201ENST00000534575 734 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.55□□□□□ -1.52
CX3CL1P78423 MTND2P17-201ENST00000550281 688 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC009268.1-201ENST00000561352 1203 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC026458.1-201ENST00000564330 438 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC111186.1-201ENST00000604684 130 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 AL121782.1-201ENST00000611242 413 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 AL391261.1-201ENST00000555712 1479 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CL1P78423 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.55□□□□□ -1.52
CX3CL1P78423 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CL1P78423 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CL1P78423 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CL1P78423 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.54□□□□□ -1.52
CX3CL1P78423 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CL1P78423 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CX3CL1P78423 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CL1P78423 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CL1P78423 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 AC129502.1-201ENST00000623261 1654 ntBASIC5.54□□□□□ -1.52
CX3CL1P78423 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CX3CL1P78423 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CL1P78423 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CX3CL1P78423 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CL1P78423 RPL12P13-201ENST00000310055 497 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms