Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.56□□□□□ -1.2
CIITAP33076 BLNK-209ENST00000495266 440 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 AC026956.1-201ENST00000558741 396 ntBASIC7.56□□□□□ -1.2
CIITAP33076 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 RN7SL366P-201ENST00000577957 292 ntBASIC7.56□□□□□ -1.2
CIITAP33076 MIR3157-201ENST00000578688 85 ntBASIC7.56□□□□□ -1.2
CIITAP33076 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 AC007485.2-201ENST00000623493 1667 ntBASIC7.56□□□□□ -1.2
CIITAP33076 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 CLCA3P-203ENST00000490028 2781 ntBASIC7.56□□□□□ -1.2
CIITAP33076 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.55□□□□□ -1.2
CIITAP33076 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CIITAP33076 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.55□□□□□ -1.2
CIITAP33076 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 SPATA31C1-201ENST00000420021 3895 ntBASIC7.55□□□□□ -1.2
CIITAP33076 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 AC128677.1-201ENST00000436016 442 ntBASIC7.55□□□□□ -1.2
CIITAP33076 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 COL11A2P1-205ENST00000441798 676 ntBASIC7.55□□□□□ -1.2
CIITAP33076 GAPDHP37-201ENST00000442317 968 ntBASIC7.55□□□□□ -1.2
CIITAP33076 RPL23AP68-201ENST00000480924 445 ntBASIC7.55□□□□□ -1.2
CIITAP33076 RN7SL612P-201ENST00000497704 295 ntBASIC7.55□□□□□ -1.2
CIITAP33076 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 AC087360.1-201ENST00000518788 616 ntBASIC7.55□□□□□ -1.2
CIITAP33076 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CIITAP33076 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.55□□□□□ -1.2
CIITAP33076 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.55□□□□□ -1.2
CIITAP33076 AC024267.2-201ENST00000582737 417 ntBASIC7.55□□□□□ -1.2
CIITAP33076 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.55□□□□□ -1.2
CIITAP33076 AC114477.1-201ENST00000605097 605 ntBASIC7.55□□□□□ -1.2
CIITAP33076 MIR7854-201ENST00000620068 65 ntBASIC7.55□□□□□ -1.2
CIITAP33076 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.55□□□□□ -1.2
CIITAP33076 CLUHP10-201ENST00000631979 980 ntBASIC7.55□□□□□ -1.2
CIITAP33076 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.55□□□□□ -1.2
CIITAP33076 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 NR1H5P-201ENST00000452683 1377 ntBASIC7.55□□□□□ -1.2
CIITAP33076 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.55□□□□□ -1.2
CIITAP33076 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CIITAP33076 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CIITAP33076 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.54□□□□□ -1.2
CIITAP33076 AC104162.1-201ENST00000430831 2382 ntBASIC7.54□□□□□ -1.2
CIITAP33076 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
CIITAP33076 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CIITAP33076 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CIITAP33076 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.54□□□□□ -1.2
CIITAP33076 SNORA38B-201ENST00000363524 131 ntBASIC7.54□□□□□ -1.2
CIITAP33076 AL034417.1-201ENST00000399343 800 ntBASIC7.54□□□□□ -1.2
CIITAP33076 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CIITAP33076 UBTFL2-201ENST00000411859 1191 ntBASIC7.54□□□□□ -1.2
CIITAP33076 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.54□□□□□ -1.2
CIITAP33076 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.54□□□□□ -1.2
CIITAP33076 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.54□□□□□ -1.2
CIITAP33076 FAM183DP-201ENST00000421987 399 ntBASIC7.54□□□□□ -1.2
CIITAP33076 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.54□□□□□ -1.2
CIITAP33076 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.54□□□□□ -1.2
CIITAP33076 SULT1D1P-201ENST00000458020 882 ntBASIC7.54□□□□□ -1.2
CIITAP33076 SEPT14P1-201ENST00000458703 648 ntBASIC7.54□□□□□ -1.2
CIITAP33076 RN7SL393P-201ENST00000463588 296 ntBASIC7.54□□□□□ -1.2
CIITAP33076 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms