Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC009948.3-201ENST00000603415 1798 ntBASIC8.4□□□□□ -1.06
VARSP26640 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.4□□□□□ -1.06
VARSP26640 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 CD200-203ENST00000473539 1524 ntTSL 2 BASIC8.4□□□□□ -1.06
VARSP26640 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.4□□□□□ -1.06
VARSP26640 AP002001.2-201ENST00000529025 1469 ntBASIC8.4□□□□□ -1.06
VARSP26640 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC8.4□□□□□ -1.06
VARSP26640 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 AP000705.2-201ENST00000433524 1386 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC131935.2-201ENST00000623649 1371 ntBASIC8.4□□□□□ -1.06
VARSP26640 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
VARSP26640 RNA5SP74-201ENST00000363538 109 ntBASIC8.4□□□□□ -1.06
VARSP26640 Y_RNA.450-201ENST00000384198 113 ntBASIC8.4□□□□□ -1.06
VARSP26640 U3.17-201ENST00000390863 203 ntBASIC8.4□□□□□ -1.06
VARSP26640 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 U3.33-201ENST00000408117 204 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 RPS10P3-201ENST00000439253 494 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC018738.1-201ENST00000441378 210 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC107983.1-201ENST00000442562 210 ntBASIC8.4□□□□□ -1.06
VARSP26640 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 AC008026.1-201ENST00000460492 447 ntBASIC8.4□□□□□ -1.06
VARSP26640 RN7SL401P-201ENST00000470065 298 ntBASIC8.4□□□□□ -1.06
VARSP26640 MTND6P6-201ENST00000478031 263 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC092943.1-201ENST00000485389 878 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC109462.1-201ENST00000491087 368 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC073358.1-201ENST00000505671 684 ntBASIC8.4□□□□□ -1.06
VARSP26640 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.4□□□□□ -1.06
VARSP26640 MTCO3P9-201ENST00000506989 781 ntBASIC8.4□□□□□ -1.06
VARSP26640 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.4□□□□□ -1.06
VARSP26640 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 OR10J2P-201ENST00000514684 961 ntBASIC8.4□□□□□ -1.06
VARSP26640 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.4□□□□□ -1.06
VARSP26640 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 AC022832.1-201ENST00000530718 645 ntBASIC8.4□□□□□ -1.06
VARSP26640 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 OR7E159P-201ENST00000553761 298 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC005479.1-201ENST00000554629 451 ntBASIC8.4□□□□□ -1.06
VARSP26640 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 AC121758.1-202ENST00000556917 658 ntBASIC8.4□□□□□ -1.06
VARSP26640 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 MIR4528-201ENST00000577763 90 ntBASIC8.4□□□□□ -1.06
VARSP26640 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.4□□□□□ -1.06
VARSP26640 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 AC103792.1-201ENST00000603591 919 ntBASIC8.4□□□□□ -1.06
VARSP26640 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 AL008582.1-201ENST00000609612 442 ntBASIC8.4□□□□□ -1.06
VARSP26640 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC8.4□□□□□ -1.06
VARSP26640 AC022509.4-201ENST00000621404 572 ntBASIC8.4□□□□□ -1.06
VARSP26640 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 FAM238C-205ENST00000640641 391 ntBASIC8.4□□□□□ -1.06
VARSP26640 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.4□□□□□ -1.06
VARSP26640 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
VARSP26640 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
VARSP26640 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
VARSP26640 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.07
VARSP26640 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
VARSP26640 AC245060.6-201ENST00000624350 8420 ntBASIC8.4□□□□□ -1.07
VARSP26640 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VARSP26640 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.4□□□□□ -1.07
VARSP26640 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.4□□□□□ -1.07
VARSP26640 AL162632.3-201ENST00000566976 1625 ntBASIC8.4□□□□□ -1.07
VARSP26640 AC008985.1-201ENST00000624169 2239 ntBASIC8.39□□□□□ -1.07
VARSP26640 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC091305.2-201ENST00000624049 1576 ntBASIC8.39□□□□□ -1.07
VARSP26640 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AC005539.1-201ENST00000443768 1479 ntBASIC8.39□□□□□ -1.07
VARSP26640 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VARSP26640 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 BEND6-201ENST00000370745 579 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms