Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PPP1R2P6-201ENST00000478565 588 ntBASIC6.22□□□□□ -1.41
NCK1P16333 AC017007.1-201ENST00000511960 415 ntBASIC6.22□□□□□ -1.41
NCK1P16333 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC6.22□□□□□ -1.41
NCK1P16333 AC084337.1-201ENST00000524809 686 ntBASIC6.22□□□□□ -1.41
NCK1P16333 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.22□□□□□ -1.41
NCK1P16333 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.22□□□□□ -1.41
NCK1P16333 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.22□□□□□ -1.41
NCK1P16333 AC106785.4-201ENST00000569492 412 ntBASIC6.22□□□□□ -1.41
NCK1P16333 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.22□□□□□ -1.41
NCK1P16333 RN7SL664P-201ENST00000584239 305 ntBASIC6.22□□□□□ -1.41
NCK1P16333 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.22□□□□□ -1.41
NCK1P16333 MIR6737-201ENST00000617385 70 ntBASIC6.22□□□□□ -1.41
NCK1P16333 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.22□□□□□ -1.41
NCK1P16333 AL121936.2-201ENST00000641935 662 ntBASIC6.22□□□□□ -1.41
NCK1P16333 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 AC079753.1-201ENST00000623243 3868 ntBASIC6.22□□□□□ -1.41
NCK1P16333 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NCK1P16333 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.22□□□□□ -1.41
NCK1P16333 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.22□□□□□ -1.41
NCK1P16333 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NCK1P16333 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NCK1P16333 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NCK1P16333 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NCK1P16333 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NCK1P16333 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NCK1P16333 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.22□□□□□ -1.41
NCK1P16333 AC011815.2-201ENST00000618230 2021 ntBASIC6.21□□□□□ -1.41
NCK1P16333 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.21□□□□□ -1.41
NCK1P16333 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.21□□□□□ -1.41
NCK1P16333 AC010624.4-201ENST00000597606 1351 ntBASIC6.21□□□□□ -1.41
NCK1P16333 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
NCK1P16333 AL359263.1-201ENST00000441188 2796 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AC020658.2-201ENST00000559030 4020 ntBASIC6.21□□□□□ -1.42
NCK1P16333 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
NCK1P16333 RNA5SP53-201ENST00000391299 120 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 RPS7P12-201ENST00000422385 582 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.21□□□□□ -1.42
NCK1P16333 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 BX005266.3-201ENST00000443013 1075 ntBASIC6.21□□□□□ -1.42
NCK1P16333 MGAT2P1-201ENST00000449718 797 ntBASIC6.21□□□□□ -1.42
NCK1P16333 RN7SL165P-201ENST00000477476 291 ntBASIC6.21□□□□□ -1.42
NCK1P16333 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NCK1P16333 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 MTCYBP44-201ENST00000514835 823 ntBASIC6.21□□□□□ -1.42
NCK1P16333 RNA5SP278-201ENST00000517055 102 ntBASIC6.21□□□□□ -1.42
NCK1P16333 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.21□□□□□ -1.42
NCK1P16333 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 AC073916.1-201ENST00000545095 130 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.21□□□□□ -1.42
NCK1P16333 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.21□□□□□ -1.42
NCK1P16333 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.21□□□□□ -1.42
NCK1P16333 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.21□□□□□ -1.42
NCK1P16333 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.21□□□□□ -1.42
NCK1P16333 BUB1P1-201ENST00000603541 607 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AL356986.1-201ENST00000604085 341 ntBASIC6.21□□□□□ -1.42
NCK1P16333 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 AC004241.2-201ENST00000614562 444 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AC008626.2-201ENST00000624425 248 ntBASIC6.21□□□□□ -1.42
NCK1P16333 AC068769.1-201ENST00000474767 2426 ntBASIC6.21□□□□□ -1.42
NCK1P16333 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.21□□□□□ -1.42
NCK1P16333 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.21□□□□□ -1.42
NCK1P16333 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NCK1P16333 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCK1P16333 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
NCK1P16333 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.2□□□□□ -1.42
NCK1P16333 LINC01616-201ENST00000561816 2280 ntBASIC6.2□□□□□ -1.42
NCK1P16333 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.2□□□□□ -1.42
NCK1P16333 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
NCK1P16333 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCK1P16333 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.2□□□□□ -1.42
NCK1P16333 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCK1P16333 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.2□□□□□ -1.42
NCK1P16333 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCK1P16333 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NCK1P16333 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NCK1P16333 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.2□□□□□ -1.42
NCK1P16333 AC005225.5-201ENST00000623547 2225 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms