Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR621-201ENST00000384919 96 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL139158.1-201ENST00000424719 340 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 CCNJP1-201ENST00000450600 1149 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 MARK2P8-201ENST00000476069 952 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 OR9L1P-201ENST00000529493 933 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC105036.1-201ENST00000566222 271 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 RN7SL230P-201ENST00000580835 303 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 SYPL1P2-201ENST00000582878 727 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 SNX18P10-201ENST00000625014 519 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL117378.2-201ENST00000622916 1337 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC096992.2-201ENST00000609553 1684 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 PRELID1P1-201ENST00000403549 660 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 MRPS21P5-201ENST00000417885 231 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AL360013.1-201ENST00000419031 858 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 PCNPP2-201ENST00000441651 455 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 EEF1B2P3-201ENST00000447718 678 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC097359.1-201ENST00000447946 463 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC236972.4-201ENST00000458091 963 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 RPS27P20-201ENST00000492051 246 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC026956.1-201ENST00000558741 396 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC010333.3-201ENST00000615100 402 ntBASIC7.9□□□□□ -1.14
HLA-DOAP06340 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.9□□□□□ -1.14
HLA-DOAP06340 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HLA-DOAP06340 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HLA-DOAP06340 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.9□□□□□ -1.15
HLA-DOAP06340 AL034417.4-202ENST00000642135 2236 ntBASIC7.9□□□□□ -1.15
HLA-DOAP06340 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.9□□□□□ -1.15
HLA-DOAP06340 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.9□□□□□ -1.15
HLA-DOAP06340 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.9□□□□□ -1.15
HLA-DOAP06340 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 RPL12P13-201ENST00000310055 497 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 RNA5SP485-201ENST00000365053 119 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms