Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC115223.1-201ENST00000466377 870 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL621P-201ENST00000472565 299 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC008629.3-201ENST00000505786 586 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 IGBP1P5-201ENST00000507524 1000 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 SETP21-201ENST00000514799 892 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AP003033.2-201ENST00000528901 805 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ADI1P3-201ENST00000549509 470 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 LINC00674-202ENST00000590734 160 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 BNIP3P4-201ENST00000604946 565 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC005962.2-201ENST00000611427 652 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AL356321.1-201ENST00000621360 228 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AL136981.1-203ENST00000451452 3844 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC104964.2-201ENST00000562242 4641 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 SNORD65.1-201ENST00000390889 71 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LDHAP4-201ENST00000397561 998 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL035467.1-201ENST00000403583 686 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL357084.1-201ENST00000407538 454 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 MIR1272-201ENST00000408106 129 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 RPSAP21-201ENST00000414293 885 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC006455.7-201ENST00000422502 392 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL358976.1-201ENST00000437555 392 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EEF1E1P1-201ENST00000446998 430 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL358876.1-201ENST00000453364 1075 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC103563.4-201ENST00000454384 368 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL418P-201ENST00000473031 287 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 VPS26AP1-201ENST00000483197 979 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 CDH12P2-201ENST00000504393 298 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 ENPP7P1-201ENST00000509557 999 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 TCP11X3P-202ENST00000514289 1254 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC025881.1-201ENST00000518851 512 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC124290.2-201ENST00000519431 286 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms