Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 RN7SKP296-201ENST00000411185 341 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AL589794.1-201ENST00000424971 390 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC073476.1-201ENST00000452854 407 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AP003385.3-201ENST00000472498 287 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 RPS7P11-201ENST00000484240 586 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 RN7SL561P-201ENST00000488553 281 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AL513218.1-201ENST00000606527 391 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 OR1N1-202ENST00000619659 939 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC211486.4-201ENST00000621495 113 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 CLUHP10-201ENST00000631979 980 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC099654.15-201ENST00000639802 509 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 PSMC1P4-201ENST00000515236 1327 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 MROH3P-201ENST00000435735 2676 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC107980.1-201ENST00000558671 3355 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 MAPK10-383ENST00000642032 3390 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OR7A2P-201ENST00000304105 930 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SNORA38B-201ENST00000363524 131 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 RNA5SP140-201ENST00000364524 92 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SNORD94-201ENST00000386037 137 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 RNA5SP155-201ENST00000411154 129 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AL034369.1-201ENST00000453808 477 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 RN7SL502P-201ENST00000481857 290 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC117395.1-201ENST00000487390 403 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC114324.2-202ENST00000503812 134 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 MRPL57P6-201ENST00000506570 309 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 MRPS5P3-201ENST00000515577 166 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OR9G2P-201ENST00000533326 880 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC106785.4-201ENST00000569492 412 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC244517.3-201ENST00000616254 1235 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms