Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC010719.1-201ENST00000602992 747 ntBASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 AC005393.1-201ENST00000617916 584 ntBASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 MIR6741-201ENST00000618782 63 ntBASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 AC068234.2-201ENST00000619646 522 ntBASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 MEST-203ENST00000378576 2180 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CROCCP3Q8IVE0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 KYNUP3-201ENST00000574386 1341 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC011815.2-201ENST00000618230 2021 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ATP5BP1-201ENST00000411980 1574 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 RNU1-16P-201ENST00000365477 164 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 RPL12P1-201ENST00000374520 498 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 TRAV35-201ENST00000390462 330 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 HMGB3P1-201ENST00000393368 573 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 PTMAP8-201ENST00000397729 342 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL355862.1-201ENST00000412705 353 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL691447.1-201ENST00000419456 387 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 GTF2F2P2-201ENST00000445825 721 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 RN7SL124P-201ENST00000498656 285 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 OR7E163P-201ENST00000505943 894 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AP001357.1-201ENST00000586304 1053 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 OR5AH1P-201ENST00000595968 283 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AF146191.1-201ENST00000604941 889 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC022960.2-201ENST00000616300 666 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 AC002094.5-201ENST00000623773 629 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 MIPEPP2-201ENST00000422560 1819 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 DDX50P1-201ENST00000438163 2400 ntBASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CROCCP3Q8IVE0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.02□□□□□ -1.44
CROCCP3Q8IVE0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 AC129502.1-201ENST00000623261 1654 ntBASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CROCCP3Q8IVE0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms