Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 ABCA11P-202ENST00000504019 2110 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC009362.1-201ENST00000427253 406 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MYL6P3-201ENST00000436904 432 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 OSTCP2-201ENST00000437956 444 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MEF2AP1-201ENST00000454867 863 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 RPL21P42-201ENST00000488408 464 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 CLCA3P-203ENST00000490028 2781 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MTCO3P42-201ENST00000509488 518 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MTCO3P39-201ENST00000514812 518 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC093844.1-201ENST00000514910 1361 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 IGLC4-201ENST00000517690 248 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 HNRNPCP8-201ENST00000528764 888 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 TRIM53CP-201ENST00000531490 1354 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 DPPA3P2-201ENST00000553589 478 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC233968.1-201ENST00000611212 1300 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC017037.4-201ENST00000624526 826 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MIR665-201ENST00000635949 72 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MAPK10-270ENST00000641102 3538 ntBASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NHLRC1Q6VVB1 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 RACGAP1P-201ENST00000550663 1879 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 EEF1GP6-201ENST00000402309 905 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 RN7SKP268-201ENST00000411107 316 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AL139135.1-201ENST00000412675 209 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 RPSAP60-201ENST00000415403 880 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 TRGV7-201ENST00000427089 353 ntBASIC6.11□□□□□ -1.43
NHLRC1Q6VVB1 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms