Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 RPL11P4-201ENST00000332269 436 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 SNORA38B-201ENST00000363524 131 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PSMC1P2-201ENST00000423961 1204 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AC083862.1-201ENST00000427378 1242 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AL645939.3-201ENST00000435408 225 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 RN7SL569P-201ENST00000494652 288 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PABPC1P1-201ENST00000506347 591 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AC018692.2-201ENST00000624130 348 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 AC114546.4-201ENST00000624413 369 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 MIR1910-201ENST00000636955 80 ntBASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM1Q2M3G4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 IFIT1P1-201ENST00000400497 1449 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AC005702.3-201ENST00000585345 1447 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 YWHAZP6-201ENST00000399764 738 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 PRELID1P1-201ENST00000403549 660 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RNA5SP198-201ENST00000410376 127 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RN7SKP271-201ENST00000410528 320 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RNA5SP115-201ENST00000411160 107 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RPS7P12-201ENST00000422385 582 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 GPN3P1-201ENST00000423883 535 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 POU5F1P5-201ENST00000445059 658 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 SETP4-201ENST00000455717 868 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RPL5P14-201ENST00000494197 878 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 HMGN1P17-201ENST00000513734 295 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 FXNP1-201ENST00000555153 337 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 RN7SL475P-201ENST00000583379 298 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AC011921.2-201ENST00000589465 152 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AL589743.6-201ENST00000611025 117 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 uc_338.31-201ENST00000615595 186 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 AC110597.1-201ENST00000562669 3176 ntBASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.79□□□□□ -1.16
SHROOM1Q2M3G4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.78□□□□□ -1.16
SHROOM1Q2M3G4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms