Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PDS5AQ29RF7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PDS5AQ29RF7 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PDS5AQ29RF7 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 RPL31P11-201ENST00000426558 1558 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 MIR541-201ENST00000401360 84 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AL049697.3-201ENST00000406493 982 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 TIMM8BP2-201ENST00000445940 251 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC097359.1-201ENST00000447946 463 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 GAPDHP16-201ENST00000448152 962 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC236972.4-201ENST00000458091 963 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC117500.1-201ENST00000497352 755 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC093816.1-201ENST00000515076 913 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC135983.3-201ENST00000528049 1226 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 OR4A13P-201ENST00000529316 942 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC133552.4-201ENST00000576103 676 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 RN7SL230P-201ENST00000580835 303 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AL354718.1-201ENST00000619764 589 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AC114546.4-201ENST00000624413 369 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AL132796.3-201ENST00000624703 900 ntBASIC7.99□□□□□ -1.13
PDS5AQ29RF7 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDS5AQ29RF7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 RN7SKP86-201ENST00000410454 332 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 RPL21P50-201ENST00000417698 477 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 RPL23AP68-201ENST00000480924 445 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC139272.1-201ENST00000505516 640 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC131392.1-201ENST00000506490 633 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AL049840.5-201ENST00000602827 552 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AL356986.1-201ENST00000604085 341 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 AC111152.1-202ENST00000635848 339 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 SMG1P5-202ENST00000529428 4219 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 SMG1P2-201ENST00000566127 4221 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 MTCO1P25-201ENST00000414449 1799 ntBASIC7.98□□□□□ -1.13
PDS5AQ29RF7 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PDS5AQ29RF7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms