Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 AC078880.4-201ENST00000617627 1749 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AL355974.1-201ENST00000618896 1708 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 RNU12-2P-201ENST00000364789 156 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 RNA5SP172-201ENST00000365061 118 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 AL353692.2-201ENST00000407054 335 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.45□□□□□ -1.38
SUMO3P55854 AL604028.2-201ENST00000437848 788 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 HMGN1P6-201ENST00000438508 291 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 RPLP0P1-201ENST00000457002 361 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 AL591122.1-201ENST00000487348 492 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 RPS4XP23-201ENST00000487801 237 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AC026826.1-201ENST00000493002 361 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 RPS10P20-201ENST00000494130 463 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.45□□□□□ -1.38
SUMO3P55854 MTCO1P31-201ENST00000506355 492 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 SETP21-201ENST00000514799 892 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC010463.3-201ENST00000594077 500 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 GAPDHP41-201ENST00000613707 975 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC022960.3-201ENST00000619794 441 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AC009269.6-201ENST00000621778 588 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC183089.2-201ENST00000637931 916 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 AL356361.1-201ENST00000400943 1459 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SUMO3P55854 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.45□□□□□ -1.38
SUMO3P55854 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 AC133552.3-201ENST00000572236 1869 ntBASIC6.45□□□□□ -1.38
SUMO3P55854 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 SAMM50P1-201ENST00000455403 1399 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.44□□□□□ -1.38
SUMO3P55854 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AL356317.1-201ENST00000396110 1436 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.44□□□□□ -1.38
SUMO3P55854 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 RNA5SP114-201ENST00000363780 113 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 MIR199B-201ENST00000384849 110 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SUMO3P55854 Z86062.1-201ENST00000406773 777 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 SOD1P1-201ENST00000407803 440 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 RANP4-201ENST00000413361 655 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.44□□□□□ -1.38
SUMO3P55854 AL354983.1-201ENST00000434580 906 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AC046176.1-201ENST00000435260 1170 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 OSTCP2-201ENST00000437956 444 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.44□□□□□ -1.38
SUMO3P55854 AL353803.3-201ENST00000444641 335 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AL157884.3-201ENST00000448273 1184 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.44□□□□□ -1.38
SUMO3P55854 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.44□□□□□ -1.38
SUMO3P55854 MTND2P6-201ENST00000455337 1030 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 RPS14P8-201ENST00000478778 369 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 HMGB1P3-201ENST00000502802 616 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 AC010409.2-201ENST00000505780 478 ntBASIC6.44□□□□□ -1.38
SUMO3P55854 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SUMO3P55854 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms