Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC234772.3-201ENST00000602277 528 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC023513.1-201ENST00000604396 691 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC112503.1-201ENST00000608436 391 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC005355.2-201ENST00000625064 484 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 MTND5P31-201ENST00000419366 1374 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL6A2P12110 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL6A2P12110 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 MIR640-201ENST00000385086 96 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL6A2P12110 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 NPM1P36-201ENST00000415681 835 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 GAPDHP55-201ENST00000423136 803 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 NPM1P26-201ENST00000426339 738 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 ARL5AP3-201ENST00000439327 386 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.17□□□□□ -1.26
COL6A2P12110 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 RPSAP49-201ENST00000445182 886 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC008967.1-201ENST00000504843 163 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC006070.1-201ENST00000508151 193 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC021106.1-201ENST00000509020 1058 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC121161.1-201ENST00000510606 652 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 MTATP6P15-201ENST00000527233 835 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC118942.1-201ENST00000529674 1035 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 OR7E2P-201ENST00000533071 889 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 AL355076.3-201ENST00000555838 587 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 SETP3-201ENST00000581726 813 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 AC013444.2-201ENST00000603317 787 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC064807.4-201ENST00000607201 407 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC006335.3-201ENST00000613408 292 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.17□□□□□ -1.26
COL6A2P12110 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 AC132825.7-201ENST00000638744 335 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL6A2P12110 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.17□□□□□ -1.26
COL6A2P12110 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL6A2P12110 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL6A2P12110 VEZF1P1-201ENST00000423931 1541 ntBASIC7.17□□□□□ -1.26
COL6A2P12110 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms