Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RN7SL382P-201ENST00000482631 282 ntBASIC7.09□□□□□ -1.27
APOEP02649 RN7SL350P-201ENST00000492591 299 ntBASIC7.09□□□□□ -1.27
APOEP02649 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 AC026774.2-201ENST00000513990 1098 ntBASIC7.09□□□□□ -1.27
APOEP02649 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.09□□□□□ -1.27
APOEP02649 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.09□□□□□ -1.27
APOEP02649 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC7.09□□□□□ -1.27
APOEP02649 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
APOEP02649 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 AL035410.2-201ENST00000604963 864 ntBASIC7.09□□□□□ -1.27
APOEP02649 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
APOEP02649 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 HSPD1P4-201ENST00000547203 1702 ntBASIC7.09□□□□□ -1.27
APOEP02649 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
APOEP02649 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.09□□□□□ -1.28
APOEP02649 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.09□□□□□ -1.28
APOEP02649 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
APOEP02649 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 AC007406.5-201ENST00000570140 3170 ntBASIC7.08□□□□□ -1.28
APOEP02649 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 RNA5SP65-201ENST00000363166 119 ntBASIC7.08□□□□□ -1.28
APOEP02649 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
APOEP02649 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
APOEP02649 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.08□□□□□ -1.28
APOEP02649 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.08□□□□□ -1.28
APOEP02649 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.08□□□□□ -1.28
APOEP02649 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 AHCYP8-201ENST00000425108 209 ntBASIC7.08□□□□□ -1.28
APOEP02649 ETF1P1-206ENST00000427296 984 ntBASIC7.08□□□□□ -1.28
APOEP02649 PAICSP2-201ENST00000429118 1150 ntBASIC7.08□□□□□ -1.28
APOEP02649 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.08□□□□□ -1.28
APOEP02649 RN7SKP198-201ENST00000459286 306 ntBASIC7.08□□□□□ -1.28
APOEP02649 UOX-201ENST00000471089 899 ntBASIC7.08□□□□□ -1.28
APOEP02649 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 AC021146.11-201ENST00000503319 491 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.08□□□□□ -1.28
APOEP02649 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 AC010442.1-201ENST00000515583 816 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC093878.1-201ENST00000515630 432 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.08□□□□□ -1.28
APOEP02649 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 AL591767.3-201ENST00000554632 525 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 RN7SL199P-201ENST00000578752 281 ntBASIC7.08□□□□□ -1.28
APOEP02649 RN7SL656P-201ENST00000579044 281 ntBASIC7.08□□□□□ -1.28
APOEP02649 RN7SL404P-201ENST00000582421 281 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC015818.6-201ENST00000584274 634 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.08□□□□□ -1.28
APOEP02649 AC139493.1-201ENST00000604368 397 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 U91328.4-201ENST00000608919 517 ntBASIC7.08□□□□□ -1.28
APOEP02649 AC131009.3-201ENST00000621809 287 ntBASIC7.08□□□□□ -1.28
APOEP02649 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.08□□□□□ -1.28
APOEP02649 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
APOEP02649 CYP2G2P-201ENST00000594920 1485 ntBASIC7.08□□□□□ -1.28
APOEP02649 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
APOEP02649 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.08□□□□□ -1.28
APOEP02649 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
APOEP02649 AC092701.1-201ENST00000623627 1551 ntBASIC7.08□□□□□ -1.28
APOEP02649 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 AL022323.4-201ENST00000623980 13120 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC004023.1-201ENST00000561473 1744 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC078880.4-201ENST00000617627 1749 ntBASIC7.07□□□□□ -1.28
APOEP02649 AP002833.3-201ENST00000625075 2265 ntBASIC7.07□□□□□ -1.28
APOEP02649 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms