Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 AC073429.2-201ENST00000569694 1444 ntBASIC9.02□□□□□ -0.97
ALDH1A1P00352 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 TRAF6P1-201ENST00000429404 1558 ntBASIC9.02□□□□□ -0.97
ALDH1A1P00352 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 OR4C1P-202ENST00000641065 1569 ntBASIC9.02□□□□□ -0.97
ALDH1A1P00352 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALDH1A1P00352 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC9.02□□□□□ -0.97
ALDH1A1P00352 MAPK10-325ENST00000641537 2623 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 MBP-206ENST00000397863 4800 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 RNA5SP396-201ENST00000364834 120 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 U3.14-201ENST00000365363 227 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 Y_RNA.472-201ENST00000384322 102 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 RSL24D1P4-201ENST00000400938 484 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 LSM5-206ENST00000409987 504 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 OFD1P18Y-201ENST00000420889 959 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 TNPO1P1-201ENST00000423641 1138 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 USP12PX-201ENST00000432383 1057 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 RPL5P4-201ENST00000434805 886 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC125232.1-201ENST00000452554 1408 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 NECAP1P2-201ENST00000455668 727 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 CBX5P1-201ENST00000468470 561 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC004815.1-201ENST00000484185 331 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 OR9N1P-201ENST00000491296 333 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC092045.1-201ENST00000495716 1231 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 RNU6-1028P-201ENST00000517164 93 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 MTCYBP19-201ENST00000517463 1124 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC044836.1-201ENST00000519514 274 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 NDUFA3P2-201ENST00000531434 232 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AP000873.5-201ENST00000533906 236 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 MIR3671-201ENST00000580455 88 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC022146.1-201ENST00000595307 847 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AL136139.1-201ENST00000605568 222 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC090186.1-201ENST00000605991 572 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC010653.3-201ENST00000635332 232 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
ALDH1A1P00352 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALDH1A1P00352 AC008895.1-201ENST00000624074 2622 ntBASIC9.01□□□□□ -0.97
ALDH1A1P00352 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC9□□□□□ -0.97
ALDH1A1P00352 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 ASAP1-IT2-201ENST00000626977 2031 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 AC007923.2-201ENST00000584218 1591 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 AL354685.2-201ENST00000448218 1447 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms