Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
ZIC3O60481 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 AC099654.3-201ENST00000447087 1546 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 MTND2P3-201ENST00000452458 470 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 RN7SL834P-201ENST00000461450 286 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 RPL5P33-201ENST00000487833 905 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 RN7SKP196-201ENST00000516267 345 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AC113191.1-201ENST00000517759 403 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.12□□□□□ -1.43
ZIC3O60481 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZIC3O60481 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.12□□□□□ -1.43
ZIC3O60481 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ZIC3O60481 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.12□□□□□ -1.43
ZIC3O60481 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 BX322635.1-201ENST00000605804 496 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AC007993.1-201ENST00000621298 2430 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AC073592.7-201ENST00000623659 507 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AC005839.1-201ENST00000624148 3213 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZIC3O60481 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AC011379.1-201ENST00000508713 3025 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AC093278.2-201ENST00000564956 2485 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 AC010132.4-201ENST00000569883 1368 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 FDPSP5-201ENST00000399474 1057 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 MIR1266-201ENST00000408125 84 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
ZIC3O60481 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.11□□□□□ -1.43
ZIC3O60481 AL663061.1-201ENST00000416625 580 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 CDC42P6-201ENST00000421246 576 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.11□□□□□ -1.43
ZIC3O60481 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ZIC3O60481 AC010086.1-201ENST00000437359 1052 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 SNRPBP1-201ENST00000443634 282 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 PFN1P11-201ENST00000445829 389 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 RN7SL83P-201ENST00000468131 297 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 RPL7AP23-201ENST00000482625 776 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AGGF1P3-201ENST00000493675 1213 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 RPL5P11-201ENST00000498068 893 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.11□□□□□ -1.43
ZIC3O60481 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.11□□□□□ -1.43
ZIC3O60481 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.11□□□□□ -1.43
ZIC3O60481 OR7A8P-201ENST00000595427 913 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC005229.3-201ENST00000603438 323 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC131009.3-201ENST00000621809 287 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 AC005514.1-201ENST00000623521 208 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.11□□□□□ -1.43
ZIC3O60481 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 AC009831.5-201ENST00000624000 3189 ntBASIC6.11□□□□□ -1.43
ZIC3O60481 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.11□□□□□ -1.43
ZIC3O60481 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZIC3O60481 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms