Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 AC079753.1-201ENST00000623243 3868 ntBASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.45□□□□□ -1.54
RCL1Q9Y2P8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 FGG-204ENST00000405164 1539 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RNA5SP442-201ENST00000365050 107 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 NPM1P38-201ENST00000403835 865 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AL034372.1-201ENST00000407586 754 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 EIF4A1P13-201ENST00000415667 230 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC130472.1-201ENST00000427885 309 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC239367.3-201ENST00000428996 814 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 MGAT2P1-201ENST00000449718 797 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TVP23CP1-201ENST00000450317 639 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 BX323845.2-201ENST00000458382 234 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 WBP1LP1-201ENST00000460451 896 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RPSAP24-201ENST00000461543 873 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RN7SL379P-201ENST00000479912 293 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RPL23AP68-201ENST00000480924 445 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 Z99943.2-201ENST00000507585 266 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 CHCHD2P7-201ENST00000508008 452 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC083906.1-201ENST00000509298 406 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RPL37-205ENST00000509877 637 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC025252.2-201ENST00000537470 502 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC233290.1-201ENST00000553021 1186 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RN7SL786P-201ENST00000579130 298 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC020914.7-201ENST00000594477 545 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC004908.1-201ENST00000606572 541 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RN7SL778P-201ENST00000607160 297 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 uc_338.37-201ENST00000620113 186 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC021422.1-201ENST00000621212 473 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC002094.5-201ENST00000623773 629 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC020658.2-201ENST00000559030 4020 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC106872.6-201ENST00000514228 1346 ntBASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.44□□□□□ -1.54
RCL1Q9Y2P8 CASC19-228ENST00000641414 1684 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AC027575.3-201ENST00000583058 2747 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 LCN1P2-201ENST00000372030 223 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 RNU1-46P-201ENST00000384425 164 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 CYCSP17-201ENST00000407870 315 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 RN7SKP89-201ENST00000410774 242 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AC009299.1-201ENST00000429684 717 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 AC108039.2-201ENST00000440214 359 ntBASIC5.43□□□□□ -1.54
RCL1Q9Y2P8 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms