Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL139128.1-201ENST00000413921 941 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 RN7SL222P-201ENST00000476452 299 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC018552.1-201ENST00000562099 811 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 MIR193BHG-214ENST00000641765 509 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AL161901.1-201ENST00000624954 3425 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC007938.1-201ENST00000562524 2902 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 LRRC37A11P-202ENST00000579258 3717 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AC022905.1-201ENST00000503430 3048 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AL606490.1-201ENST00000452266 765 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 HIGD1AP8-201ENST00000453927 274 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 RPL23AP64-201ENST00000469465 435 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 RPL7AP6-201ENST00000477943 801 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 GAPDHP71-201ENST00000511530 1003 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 RN7SKP66-201ENST00000516681 231 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 MIR4505-201ENST00000582238 73 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 AL035422.2-201ENST00000603059 565 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
RIMBP3Q9UFD9 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RPL7P61-201ENST00000451721 751 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 OR7A11P-201ENST00000597719 953 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 OR7A1P-201ENST00000601206 970 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC100827.5-201ENST00000615883 426 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC008115.4-201ENST00000619780 775 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 MTHFD1P1-201ENST00000413059 2764 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC110079.1-201ENST00000567913 4395 ntTSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 ANO5-201ENST00000324559 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 ERG-206ENST00000398911 4914 ntTSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC138627.1-203ENST00000641872 1680 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RNA5SP350-201ENST00000363298 111 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 CYCSP51-201ENST00000443545 318 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 GEMIN2P1-201ENST00000454246 752 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC135721.2-201ENST00000464237 300 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RN7SL184P-201ENST00000488308 297 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 RN7SL346P-201ENST00000491561 294 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms