Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC005034.3-201ENST00000604845 1747 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 OR52B5P-204ENST00000641744 3467 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 MROH3P-201ENST00000435735 2676 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CDY10P-201ENST00000452415 1567 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 MAPK10-379ENST00000642013 1385 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RPL12P13-201ENST00000310055 497 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 PPIAP26-201ENST00000377951 522 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RNA5SP155-201ENST00000411154 129 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RPL23AP28-201ENST00000448062 470 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 KF459542.1-201ENST00000450908 553 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 MEF2AP1-201ENST00000454867 863 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AP003385.3-201ENST00000472498 287 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RN7SL836P-201ENST00000476140 296 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RPS7P11-201ENST00000484240 586 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RPS4XP23-201ENST00000487801 237 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC092349.1-201ENST00000504903 310 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 SNX18P23-201ENST00000510867 677 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 RN7SKP64-201ENST00000517206 328 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 EEF1B2P2-201ENST00000519625 676 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC084851.2-201ENST00000530377 364 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CLUHP10-201ENST00000631979 980 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 AC007603.3-201ENST00000636915 979 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 FANCD2P2-201ENST00000437591 1400 ntBASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP2Q9UDT6 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.02□□□□□ -1.12
CLIP2Q9UDT6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.02□□□□□ -1.12
CLIP2Q9UDT6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
CLIP2Q9UDT6 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CLIP2Q9UDT6 DDX43P1-201ENST00000510713 1763 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 MKI67P1-201ENST00000604297 1460 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 SNORA7A-201ENST00000384765 139 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 RPL9P21-201ENST00000392269 505 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 CDC42P6-201ENST00000421246 576 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AL596268.1-201ENST00000427910 1048 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 RN7SL83P-201ENST00000468131 297 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 RPS14P8-201ENST00000478778 369 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC087752.2-201ENST00000521219 281 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 BTG1P1-201ENST00000540396 508 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 MRPS21P9-201ENST00000571150 257 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 CYCSP1-201ENST00000604815 315 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AL590032.1-201ENST00000604920 252 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AL513218.1-201ENST00000606527 391 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC079414.3-201ENST00000612986 1090 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC006328.2-201ENST00000623198 397 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC012005.2-201ENST00000624333 397 ntBASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms