Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 EEF1A1P39-201ENST00000440791 250 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 ARMC8P1-201ENST00000443069 1289 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC010240.2-201ENST00000445363 1205 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 CASP3P1-201ENST00000446037 609 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC093166.2-201ENST00000455969 1017 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 RN7SL308P-201ENST00000464971 297 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 RN7SL414P-201ENST00000469545 294 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC087385.2-201ENST00000477729 498 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC095052.1-201ENST00000509955 863 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC119751.1-201ENST00000513357 765 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC006065.2-201ENST00000536978 211 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC007346.2-201ENST00000564816 892 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 BNIP3P24-201ENST00000593398 557 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC005383.1-201ENST00000622689 534 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AL390318.1-201ENST00000624564 687 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 RPSAP68-201ENST00000625020 438 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC105749.1-201ENST00000631338 2008 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 AC092821.3-202ENST00000641304 2767 ntBASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.52□□□□□ -1.05
TRAIPQ9BWF2 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AP002364.1-201ENST00000623330 3386 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 SEC63P2-201ENST00000503863 1939 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 RNU6-532P-201ENST00000384318 107 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC119751.3-201ENST00000399720 670 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AL136310.1-201ENST00000404926 654 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 SLC20A1P1-201ENST00000413906 956 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC107081.1-201ENST00000414975 361 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 DDX11L10-201ENST00000430178 571 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 DNAJA1P6-201ENST00000437347 354 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AL451063.1-201ENST00000450164 1133 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 RBMY2TP-201ENST00000451162 947 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC004263.1-201ENST00000479327 332 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC069528.1-202ENST00000482888 637 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 RN7SL647P-201ENST00000485429 300 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC108688.1-201ENST00000485817 713 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC111193.1-201ENST00000504097 155 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC025260.1-201ENST00000548858 430 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 RN7SL237P-201ENST00000580912 287 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 AC009039.2-201ENST00000624524 529 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 PARP1P1-201ENST00000413631 3026 ntBASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms