Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092725.2-201ENST00000567658 1389 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SUGT1P3-202ENST00000604259 383 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC011373.1-201ENST00000607270 237 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC009090.4-201ENST00000623921 3691 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 CLUHP10-201ENST00000631979 980 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 MFSD8-259ENST00000642042 2303 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 P2RY10-204ENST00000544091 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC011447.7-201ENST00000624228 1590 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC009148.1-201ENST00000570148 2693 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 SNORD81.2-201ENST00000365153 76 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 GAPDHP72-201ENST00000402643 1010 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AL031777.1-201ENST00000405418 499 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 SNORD88A-201ENST00000408314 91 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 RPL12P9-201ENST00000412942 488 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC006195.1-201ENST00000423599 923 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC009303.1-201ENST00000426307 352 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 GAPDHP68-201ENST00000434621 1008 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC108059.2-201ENST00000434626 151 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 SNX18P9-201ENST00000440580 835 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 RN7SL144P-201ENST00000475761 295 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 RPL39P36-201ENST00000490784 156 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 RPL29P22-201ENST00000498718 459 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC106822.1-201ENST00000502647 526 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 KLRA1P-201ENST00000503499 986 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 SRP72-202ENST00000504757 745 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 SNX5P1-201ENST00000505757 1041 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 MTND6P17-201ENST00000511811 519 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC026412.2-201ENST00000512270 1075 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AF131216.2-201ENST00000512316 564 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 snoU109.5-201ENST00000516231 132 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 RNA5SP159-201ENST00000517161 103 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC016877.2-201ENST00000522128 1069 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC239860.2-201ENST00000525886 270 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC078886.1-201ENST00000549144 554 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AL355836.1-201ENST00000555951 870 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms