Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC019178.1-201ENST00000392337 440 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AL049697.3-201ENST00000406493 982 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC096537.2-201ENST00000413707 714 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 RPS4XP17-201ENST00000479057 754 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 NPM1P27-201ENST00000502784 830 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC008429.2-201ENST00000523057 864 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 RN7SL270P-201ENST00000579643 281 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 RN7SL475P-201ENST00000583379 298 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 RPL7AP69-201ENST00000595306 806 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC114477.1-201ENST00000605097 605 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 MIR6813-201ENST00000621638 56 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 MIR6823-201ENST00000622118 61 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 CASC19-228ENST00000641414 1684 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 TNPO1P2-201ENST00000426249 2665 ntBASIC9.57□□□□□ -0.88
SIN3AQ96ST3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
SIN3AQ96ST3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AC022905.1-201ENST00000503430 3048 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 VN1R53P-201ENST00000429536 957 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AL034369.1-201ENST00000453808 477 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AC093870.1-201ENST00000506837 213 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 BUB1P1-201ENST00000603541 607 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AL390877.1-201ENST00000605704 214 ntBASIC9.56□□□□□ -0.88
SIN3AQ96ST3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SIN3AQ96ST3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC092725.2-201ENST00000567658 1389 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 VTRNA3-1P-201ENST00000362552 102 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 RN7SKP188-201ENST00000410789 317 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AL020997.1-201ENST00000446554 349 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 GAPDHP41-201ENST00000613707 975 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AP001264.1-201ENST00000620602 703 ntBASIC9.55□□□□□ -0.88
SIN3AQ96ST3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC9.55□□□□□ -0.88
SIN3AQ96ST3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 CCDC162P-202ENST00000368966 6751 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms