Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC122710.3-201ENST00000606566 541 ntBASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 AC004908.1-201ENST00000606572 541 ntBASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 AC010333.3-201ENST00000615100 402 ntBASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 AC073263.3-201ENST00000624449 858 ntBASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CCDC50Q8IVM0 AC102941.1-201ENST00000567616 1537 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC079949.2-201ENST00000617117 2933 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 TNPO1P2-201ENST00000426249 2665 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 RPL24P4-201ENST00000326586 421 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 SLC25A5P7-201ENST00000406156 896 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 RNA5SP280-201ENST00000411230 115 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CLIC4P3-201ENST00000422221 752 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 GAPDHP69-201ENST00000425504 1008 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CRYGGP-201ENST00000443337 145 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC092421.1-201ENST00000448148 418 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC087752.2-201ENST00000521219 281 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC024451.4-201ENST00000602578 752 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC009237.12-201ENST00000604755 742 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AC092960.1-201ENST00000604762 351 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AL161931.1-201ENST00000612768 246 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AL445647.2-201ENST00000615170 130 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 OR1N1-202ENST00000619659 939 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AL354718.1-201ENST00000619764 589 ntBASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC50Q8IVM0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC078880.4-201ENST00000617627 1749 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 FTH1P26-201ENST00000406512 701 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CYCSP17-201ENST00000407870 315 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 MIR1231-201ENST00000408101 92 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 RN7SKP39-201ENST00000410773 322 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC096537.2-201ENST00000413707 714 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AL713922.1-201ENST00000416477 747 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC002075.1-201ENST00000457396 676 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 RN7SL561P-201ENST00000488553 281 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AP001804.1-201ENST00000526868 919 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 OR4C1P-201ENST00000530880 937 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms