Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC017078.1-201ENST00000416146 368 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 MICG-208ENST00000416822 132 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 SNRPEP5-201ENST00000425442 278 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 GOT2P2-201ENST00000450663 1251 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 PPP1R2P6-201ENST00000478565 588 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC135999.1-201ENST00000478962 479 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AL135933.1-201ENST00000498657 802 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 RN7SKP242-201ENST00000515967 289 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 MIR4428-201ENST00000584884 73 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC011447.2-201ENST00000592921 283 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC020914.7-201ENST00000594477 545 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC120057.5-201ENST00000623840 154 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AP005139.1-201ENST00000580702 1647 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC009135.2-201ENST00000624136 1768 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AL139384.2-201ENST00000613809 3590 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 SNORA70.3-201ENST00000365075 132 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 MIR99A-201ENST00000384906 81 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RNU1-56P-201ENST00000391303 164 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RN7SKP30-201ENST00000411373 334 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 OR6C71P-201ENST00000432580 913 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 OR52U1P-201ENST00000439752 923 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RPS16P9-201ENST00000477220 427 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RPS10P28-201ENST00000480396 498 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC025271.1-201ENST00000485045 429 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AF305872.1-201ENST00000485217 471 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RPL10P7-201ENST00000495649 625 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 FAM30C-201ENST00000561158 410 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC091932.1-201ENST00000569381 427 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 RN7SL426P-201ENST00000579106 295 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CR383656.5-201ENST00000547616 1340 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC020658.2-201ENST00000559030 4020 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CDY5P-201ENST00000411487 1580 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 CDY9P-201ENST00000451397 1580 ntBASIC6.13□□□□□ -1.43
NHLRC1Q6VVB1 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms