Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BTK-209ENST00000618050 2417 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
CDC42BPAQ5VT25 AC093225.1-201ENST00000506867 1408 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 SOCS5P1-201ENST00000440415 949 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AC106800.2-201ENST00000514009 1103 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AL590065.1-201ENST00000603371 4774 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 U3.43-201ENST00000410734 213 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 MTND6P12-201ENST00000428247 522 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 CST12P-201ENST00000457644 362 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 SNORD46.2-201ENST00000516021 102 ntBASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42BPAQ5VT25 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC023194.2-201ENST00000465398 406 ntBASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 RPL12P31-201ENST00000478433 450 ntBASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 MTND6P8-201ENST00000503471 522 ntBASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC092332.1-201ENST00000563684 829 ntBASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 FLJ42393-201ENST00000623801 2270 ntBASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42BPAQ5VT25 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.77□□□□□ -0.84
CDC42BPAQ5VT25 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC9.77□□□□□ -0.84
CDC42BPAQ5VT25 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.84
CDC42BPAQ5VT25 MELK-207ENST00000536860 2342 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AL359694.2-201ENST00000567753 1615 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 RNA5SP500-201ENST00000364486 119 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 RPL7P51-201ENST00000490532 749 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 RPL5P11-201ENST00000498068 893 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 Y_RNA.667-201ENST00000516212 107 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AP001858.2-201ENST00000536213 601 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 MED21-206ENST00000546323 575 ntTSL 3 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AC020978.7-201ENST00000575953 1187 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 AC125238.2-201ENST00000430003 1440 ntBASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms