Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC009166.2-201ENST00000624410 2833 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC015871.3-201ENST00000618835 2261 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 RPL12P13-201ENST00000310055 497 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 VN1R20P-201ENST00000425215 966 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC239367.3-201ENST00000428996 814 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 RPL5P10-201ENST00000445207 894 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CCNJP2-201ENST00000457810 1163 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC021006.1-201ENST00000489849 553 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC112225.1-201ENST00000508230 297 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 RNA5SP318-201ENST00000516352 92 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC135983.3-201ENST00000528049 1226 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC124891.1-201ENST00000536322 519 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 LINC01613-201ENST00000561476 2780 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC004232.2-201ENST00000574245 821 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 MAPK10-357ENST00000641831 2858 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 Z97989.1-201ENST00000531702 2421 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 OR5M2P-202ENST00000641241 4242 ntBASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM1Q2M3G4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC110716.2-201ENST00000563865 3945 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 YWHAZP4-201ENST00000392459 708 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 RANP6-201ENST00000413691 644 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC005017.1-201ENST00000482002 490 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 RNA5SP441-201ENST00000516809 88 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC011853.1-201ENST00000518911 454 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AL133399.1-201ENST00000527476 298 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 RN7SL261P-201ENST00000613441 282 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AL354718.1-201ENST00000619764 589 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AC010325.3-201ENST00000641084 394 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SALL4P7-201ENST00000555779 3120 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 AP005139.1-201ENST00000580702 1647 ntBASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM1Q2M3G4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms