Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 BX322650.1-201ENST00000332359 2143 ntBASIC9.22□□□□□ -0.93
CCDC27Q2M243 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 EEF1A1P28-201ENST00000450915 1403 ntBASIC9.22□□□□□ -0.93
CCDC27Q2M243 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CCDC27Q2M243 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
CCDC27Q2M243 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC9.21□□□□□ -0.93
CCDC27Q2M243 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.21□□□□□ -0.93
CCDC27Q2M243 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CCDC27Q2M243 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.21□□□□□ -0.93
CCDC27Q2M243 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
CCDC27Q2M243 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
CCDC27Q2M243 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 RNA5SP53-201ENST00000391299 120 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL662791.3-201ENST00000413771 776 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL773545.3-201ENST00000414297 706 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 MTATP6P14-201ENST00000455189 673 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC135721.2-201ENST00000464237 300 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 RPS14P8-201ENST00000478778 369 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC135999.1-201ENST00000478962 479 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AK4P6-201ENST00000505168 528 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 DCAF13P2-201ENST00000514188 555 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 Vault.2-201ENST00000516519 98 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC103833.1-201ENST00000517442 172 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC018754.1-201ENST00000607486 925 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL050303.3-201ENST00000613704 284 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC012629.3-201ENST00000623397 328 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC034229.6-201ENST00000623704 224 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC006927.4-201ENST00000639187 543 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 MAPK10-350ENST00000641777 965 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 AC020978.8-201ENST00000571975 3022 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 DDX43P1-201ENST00000510713 1763 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.21□□□□□ -0.94
CCDC27Q2M243 AL359396.1-201ENST00000623151 2376 ntBASIC9.21□□□□□ -0.94
CCDC27Q2M243 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CCDC27Q2M243 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 AC034111.1-201ENST00000562143 3770 ntBASIC9.2□□□□□ -0.94
CCDC27Q2M243 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 HSP90AA2P-201ENST00000530115 2196 ntBASIC9.2□□□□□ -0.94
CCDC27Q2M243 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 AC129502.1-201ENST00000623261 1654 ntBASIC9.2□□□□□ -0.94
CCDC27Q2M243 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.2□□□□□ -0.94
CCDC27Q2M243 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 RNU12-2P-201ENST00000364789 156 ntBASIC9.2□□□□□ -0.94
CCDC27Q2M243 AC092570.3-201ENST00000420113 693 ntBASIC9.2□□□□□ -0.94
CCDC27Q2M243 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CCDC27Q2M243 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 357.3 ms